RNA id: CI01000016_07318179_07319855.mRNA


Basic Information

Item Value
RNA id CI01000016_07318179_07319855.mRNA
length 363
RNA type mRNA
GC content 0.49
exon number 2
gene id CI01000016_07318179_07319855
representative True

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 7318128 ~ 7319855 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GATGATAAAGATCTGGTGCATGAGTTTGTGATGGCTGAGGGACTCACATGTCTGATTAAAGTGGGAGCTGAGGCTGACCAAAACTACCAGAACTACATCCTCAGAGAGGGAGAGGTGTCAGGGGGGTTGTTGAAATTCAGTTTACGATCTGCAACATCCTGCCAAGCCTTTTTATTGGACGTTAAAGCATGTGGGTGCTGCCCTCTCGCAGTGGGCTGTGAAATGCGGGTGACCTCTCTGAGAGAGTTTTCAGTTCCCTTTAGACCTCCCCATTGGCCTGCAACCTCATCTCCAGGCAGAGGAAGCTCTTAGCAGCCTGTTAACATGCCTGACCTTTCACCTCACATGCATGGAGAGAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU111076 lncRNA downstream 156556 7161349 ~ 7161572 (-) True G97603
TU111074 lncRNA downstream 157502 7159973 ~ 7160626 (-) True G97601
TU111067 lncRNA downstream 194812 7122924 ~ 7123316 (-) True G97594
TU111063 lncRNA downstream 202302 7115592 ~ 7115826 (-) True G97590
TU111062 lncRNA downstream 203083 7114828 ~ 7115045 (-) True G97589
TU111113 lncRNA upstream 141336 7461191 ~ 7461463 (-) True G97640
TU111122 lncRNA upstream 161356 7481211 ~ 7534573 (-) True G97646
TU111132 lncRNA upstream 231097 7550952 ~ 7552253 (-) True G97656
TU111477 lncRNA upstream 383763 7703618 ~ 7703843 (-) True G97970
TU111452 lncRNA upstream 390124 7709979 ~ 7717050 (-) True G97947
CI01000016_07242123_07296094.mRNA mRNA downstream 21426 7240773 ~ 7296702 (-) True CI01000016_07242123_07296094
CI01000016_07204062_07211287.mRNA mRNA downstream 105682 7203992 ~ 7212446 (-) True CI01000016_07204062_07211287
CI01000016_07191021_07191531.mRNA mRNA downstream 126337 7191008 ~ 7191791 (-) True CI01000016_07191021_07191531
CI01000016_07127481_07148708.mRNA mRNA downstream 169233 7127465 ~ 7148895 (-) True CI01000016_07127481_07148708
CI01000016_07118966_07120089.mRNA mRNA downstream 198039 7118855 ~ 7120089 (-) True CI01000016_07118966_07120089
CI01000016_07421716_07426983.mRNA mRNA upstream 101735 7421590 ~ 7442256 (-) True CI01000016_07421716_07426983
CI01000016_07474484_07477222.mRNA mRNA upstream 153403 7473258 ~ 7477222 (-) True CI01000016_07474484_07477222
CI01000016_07556411_07633132.mRNA mRNA upstream 236469 7556324 ~ 7633132 (-) True CI01000016_07556411_07633132
CI01000016_07718096_07737432.mRNA mRNA upstream 398197 7718052 ~ 7737432 (-) True CI01000016_07718096_07737432
CI01000016_07845474_07849395.mRNA mRNA upstream 525619 7845474 ~ 7849426 (-) True CI01000016_07845474_07849395
TU110786 other downstream 1158407 6158986 ~ 6159721 (-) True G97341
TU110396 other downstream 1899911 5415682 ~ 5418217 (-) True G97020
TU110385 other downstream 1987282 5325519 ~ 5330846 (-) True CI01000016_05325805_05330265
TU110416 other downstream 2394724 4912708 ~ 4923404 (-) True G97040
TU110003 other downstream 3387077 3865761 ~ 3890326 (-) True G96690
TU112287 other upstream 1568978 8888833 ~ 8894737 (-) True CI01000016_08893013_08893496
TU112294 other upstream 1616934 8936789 ~ 8936818 (-) True G98677
TU112296 other upstream 1915141 9234996 ~ 9239929 (-) True G98679
TU112308 other upstream 1936247 9256102 ~ 9257611 (-) True G98691
TU112534 other upstream 2189767 9511357 ~ 9511415 (-) False G98896

Expression Profile