RNA id: TU135771



Basic Information


Item Value
RNA id TU135771
length 253
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G119570
representative True

Chromosome Information


Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 6455768 ~ 6456020 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTAAAAGTGAACGTTAGCTGTAGTGCAGTTGCGCGTGAGTTCGCAGCTTCGCACCAGTTGGCTGTGTAGTCGCTGTCTGAAGATGTCGGCAGAAGCGAGTGGCTGTTTTGCAGAATGGAAAATCCCAATTACTTCACTTTTTTGACACAGGTAGGCAAGAACATTACAGTAAAATGTAAGCTATGTCCTAGGAAGAAAAAACTGCGCACGCTCTCTTAGAGACGGTCTTCAGTCAGTGTGCTCTCAGCCAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU135768 lncRNA upstream 1503 6454041 ~ 6454265 (+) True G119567
TU135734 lncRNA upstream 13889 6438967 ~ 6441879 (+) True G119534
TU135754 lncRNA upstream 54256 6401151 ~ 6401512 (+) True G119554
TU135624 lncRNA upstream 122182 6329280 ~ 6333586 (+) True G119426
TU135622 lncRNA upstream 132043 6318726 ~ 6323725 (+) True G119424
TU135774 lncRNA downstream 2386 6458406 ~ 6458691 (+) True G119573
TU135778 lncRNA downstream 20756 6476776 ~ 6476999 (+) True G119577
TU135779 lncRNA downstream 24056 6480076 ~ 6480409 (+) True G119578
TU135814 lncRNA downstream 96201 6552221 ~ 6555282 (+) True G119613
TU135870 lncRNA downstream 221679 6677699 ~ 6677942 (+) True G119661
CI01000021_06427686_06431101.mRNA mRNA upstream 24015 6427686 ~ 6431753 (+) True CI01000021_06427686_06431101
CI01000021_06423446_06426296.mRNA mRNA upstream 28160 6423446 ~ 6427608 (+) True CI01000021_06423446_06426296
CI01000021_06411964_06421511.mRNA mRNA upstream 34257 6411964 ~ 6421511 (+) True CI01000021_06411964_06421511
CI01000021_06408474_06411089.mRNA mRNA upstream 44679 6408474 ~ 6411089 (+) True CI01000021_06408474_06411089
CI01000021_06266751_06267607.mRNA mRNA upstream 187610 6264966 ~ 6268158 (+) True CI01000021_06266751_06267607
CI01000021_06746518_06768316.mRNA mRNA downstream 290498 6746518 ~ 6768340 (+) False CI01000021_06746518_06768316
CI01000021_06773262_06780081.mRNA mRNA downstream 317242 6773262 ~ 6780081 (+) True CI01000021_06773262_06780081
CI01000021_06786996_06789224.mRNA mRNA downstream 330841 6786861 ~ 6790800 (+) False CI01000021_06786996_06789224
CI01000021_06798250_06824148.mRNA mRNA downstream 342230 6798250 ~ 6824486 (+) True CI01000021_06798250_06824148
CI01000021_06906415_06933563.mRNA mRNA downstream 450395 6906415 ~ 6934141 (+) True CI01000021_06906415_06933563
TU134547 other upstream 1566260 4842733 ~ 4886292 (+) True G118432
TU133514 other upstream 2420092 4033000 ~ 4035676 (+) True G117493
TU133500 other upstream 2498016 3956146 ~ 3957752 (+) True G117484
TU133183 other upstream 3127535 3269144 ~ 3328233 (+) False G117202
TU135922 other downstream 344124 6800144 ~ 6860606 (+) True G119701

Expression Profile