RNA id: CI01000026_14473444_14517944.mRNA



Basic Information


Item Value
RNA id CI01000026_14473444_14517944.mRNA
length 3494
RNA type mRNA
GC content 0.35
exon number 11
gene id CI01000026_14473444_14517944
representative False

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 14471557 ~ 14518132 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTATATATAGGAAAGATAGGTGTATATCTATAACAAAAAAATATATATGTAATATATATGTAATATTATATATATATATATATATATATATATATACATATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACATATATATATATATATATATATATATATATATATATATATACACATATACATACATATATATATATATATATATATATACACATACATACATACATATGCATACATGAACGTACATACCTACATACATATGCATATGTACATATACACGCATACATACACACACATATACATAAATGCCAATATACATGGATACGGTATATACATTTTCTTTATAACATCTATTGTTATTAACACATTACATTCAGTCAATTTAATTATTGAAATTAAATTACATATATCAATATAAGGATATGTAGTAATATGCAAATTCCTATTAATATCGAATGGTGTTGACAAGTTATTTCCATTAGATTCAATAAGACAGTACAGAGAGAAGAAAAAAGGAAAATAAAAAGGGGACAAAAAAAAAAGTTTTCTATTTTAATATACTTTAAAATATAATTTATTTCTGTGATGCAAAGCTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGCAATCATTTTAATATGCTGATTTGATACTCAGTTATTATAAATGTTGAAAACAGTTGTGTTGCTTAATAATTTTTTGGAACCTGTGATACTTTTTTCAGGATTCATTGATGAATAAAAGGTTAAAAAGAACAGCATTTATTCAAAGTATAAATCTTTTCTAACAATATAAATATTTACTATCACTTTTCATCAATTTAACACATCCATGCTGAATAAAAGTATTAATTTCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAATACTGACCCCCAAACTTTTGAATGGTAGTGTATATTGTTACAAAAGATTTCTATTTTAAATAAATGCTGATATTTTTTAAACTTTTTATTTATCAAAGAATCCTGAAAAAGTATCACAGGTTATAAAATAATATTAAGCAGCACAACTGTTTCCAACATAACAGTATATATATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGACAATTCAGCTTTGCAACACAGAAATAAATTATATTTTAAAGTATATTAAAATAGAAAACCATTATTTTAAATTGTAATAATTCACAATATTATTGTTTTTTCTGTATTTATTATGAAATAAATGTAGCCTTAATGAGCATAAGAGACTTAATAGTAATAGTAATGTTTCCAAACTTTTGACTGGTAGTGTATTTCAGTTCCCGTTCTGTCTATCCCATTGACGTGGTGTCAATCTGACACTAAATGGGGTTGTCCTTGAGAGCCCCAAACACCTGAGAGTAACAGAAAAGGACAATGAAATCGGCGTGTTGAATTTGCATGCCAAGCCACGCCCACTGACATACGGTATGTAAGCGCTGGCAGTGCAATACACACTTCAGCTATGTTCTTCGGAGCCGAAGCAGTGTGTCTCGACTGGAAACAGAAGAGAAGCATTTCAAATCACCTTGTTGCTGCTGGAAACACGGCACGTTCTGCGGTCCTTTCATTGTGCACAGATAAGTGCACGAGTGTTCCCCTGGGTGCTTCAGCAGCTTGCTGAAAGAGAAATTTCAGTGTTTGGGCCACGCTCACGCTTAAGCAGCGCTCGTGGGTGGCTCATGCTCTCATTGCGAACGCAGCTCTTGTATCTCTTCAAGCAACCAAGAGTCTCCTCAGCTGCTTCCTGTCCTGGTCCTTCTACCTCCGGGTACGAGGCCTCGGCAACGAGCACTGAGGTCGACTTGGGGGCTTCAATGGCAGTGCTTTCGCCGGGTGAATCCTCGCGAAACTCCCATTCTCTAGCATGCTCAGTTTCTCCGGTTGAGTTCCTGGATGAGTTTGACACTGTTTCTCTCGACGTTGCATCACATGACGTTGCGTTGCAGGGTGTATGCGGCATCTCATTCGGGGCTCTCAGAGACAATAAGTTGTCGCTTGTAACATCGGAGGGCGGGCTTATGCCTTCTGACACGTTCACTGCTACAGAGTTTGCATTCGTCTATCTCCCACCCACTGATCTGAGGGCACAGAGTGTGGTCAGTGCACTAAATCAGTTTGCCGGCTTACATTCGAAGGAGAAGAATGAATCTGTTTTAACTAGCATTATTGTATGTCTGAGGGAGACATTGTGTCACATTTATGCCAGAGGCTTCCAGATGAGGAATTTCATTAGTTTACTGCAACTCCTTAAAAAGCTGGAGAATGCTGTTATTTACCTTGCGTGCTCAGCACCACAGTGGAGAATAAAAACAACAACAACAAATGTGCCTGTAAAACTAGTTTCCACAGTCAGTACGTCTGTAAGGCACAAACAGTCATATGAAAGGCCTGCTCAAGCACTGACAGGTCCACCTAATGTGATGTTACATCATTGCTATATGGCAGGTAAAGATACACTTACATCTGTGGTATACGAGAGGAAGAGCTTCCACATTGTGCAGCTGTCTATCAGTGGGCTTGAATACAAAGGTCAACCACTCTTTCCAATTTCATTGCTGTCACTTTATGCTGTCATCACTGGATTCTTCAGCATGTGCGCTGACCTCTCTAGTGGTGAAATGGGTTCAAAAGGCACTGAGATGCATGCCAGACACAAAAACGGTTCCTTTAGACACGCACAATCTCAAGGCTCCATGACAACAGCAGCGAAGGCCAAACACAATAGAGCTCACGTACAGACTGAAAACCCTCATGTCGTCTCTGTGCTTAGGAACTACAGTATAATAATCAGAGAAGGAATCTACCCCTCTATTAAGTCAAAGCAGAGGAAGCAATCATTTATTGTAAAAGGAAATTTTCAACACAACATCTGCCTCGTCTTTTATGAGGATCAGGAGAACATACAGCAACCCCCATCTTCGCATGTGCTGGTAGGAGTGCTGAAAGATGGCCGACAGCATGCCACAGCTGTGCTAGTACTCATCACCTCTACTCTGTCATTAAACAAGATCCATGTTCACATTATAGCTCCTGTGTTTGACAACCAGCATCATTTCAACCGGAGAGCAATAATGCAGCCTTTACTCAGTGCATCATAACTGAGGCACTTGTGGGTATATCACAGCGAAAATCAATTGCTCTTAACCAAGATGCTTGACGCCAATAGTCATATTCAAACTTTACTTCTCTGACAGTTCCTCACTTTGCTCACTCATACCCTATGAAAACAATGTGCATCCTCTTAAAATGAGAATTTCACAGAGATGAAGCTTCAAACAATCCAACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU154421 lncRNA upstream 2487 14468848 ~ 14469070 (+) True G135848
TU154417 lncRNA upstream 9745 14461609 ~ 14461812 (+) True G135844
TU154398 lncRNA upstream 75353 14395971 ~ 14396204 (+) True G135825
TU154388 lncRNA upstream 105814 14365523 ~ 14365743 (+) True G135815
TU154341 lncRNA upstream 136649 14334309 ~ 14334908 (+) False G135770
TU154557 lncRNA downstream 36764 14554896 ~ 14555102 (+) True G135978
TU154558 lncRNA downstream 37000 14555132 ~ 14555422 (+) True G135979
TU154595 lncRNA downstream 220008 14738140 ~ 14743008 (+) True G136012
TU154617 lncRNA downstream 255140 14773272 ~ 14773507 (+) True G136034
TU154619 lncRNA downstream 258555 14776687 ~ 14776962 (+) True G136036
CI01000026_14282383_14282886.mRNA mRNA upstream 188488 14282145 ~ 14283069 (+) True CI01000026_14282383_14282886
CI01000026_14205243_14205597.mRNA mRNA upstream 265294 14202436 ~ 14206263 (+) True CI01000026_14205243_14205597
CI01000026_14178928_14180619.mRNA mRNA upstream 290825 14178250 ~ 14180732 (+) True CI01000026_14178928_14180619
CI01000026_14074647_14076746.mRNA mRNA upstream 394456 14074410 ~ 14077101 (+) True CI01000026_14074647_14076746
CI01000026_13837986_13903960.mRNA mRNA upstream 567295 13837739 ~ 13904262 (+) True CI01000026_13837986_13903960
CI01000026_14530926_14542878.mRNA mRNA downstream 10772 14528904 ~ 14543624 (+) True CI01000026_14530926_14542878
CI01000026_14579105_14590405.mRNA mRNA downstream 60973 14579105 ~ 14591232 (+) True CI01000026_14579105_14590405
CI01000026_14607563_14660403.mRNA mRNA downstream 89431 14607563 ~ 14660403 (+) True CI01000026_14607563_14660403
CI01000026_14677273_14679619.mRNA mRNA downstream 158819 14676951 ~ 14679772 (+) True CI01000026_14677273_14679619
CI01000026_14685877_14686783.mRNA mRNA downstream 167714 14685846 ~ 14687092 (+) True CI01000026_14685877_14686783
TU151829 other upstream 2994650 11476117 ~ 11476907 (+) False G133542
TU151777 other upstream 3216484 11244933 ~ 11255073 (+) True G133497
TU151694 other upstream 3392477 11070768 ~ 11070876 (+) True G133429
TU151441 other upstream 4309596 10159819 ~ 10161961 (+) True G133192
TU150881 other upstream 4902397 9568739 ~ 9569160 (+) False G132667

Expression Profile