RNA id: TU177427



Basic Information


Item Value
RNA id TU177427
length 202
lncRNA type inter_gene
GC content 0.27
exon number 1
gene id G156266
representative True

Chromosome Information


Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6269919 ~ 6270120 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAAATTATTTAGACATTTTTGATATTTTTGATATATTTTTACTAGTGTGTGCAGGACACTATAGTTCATTTATGTAAGTGAGGATAGCAAAATAAAGTAAACTGTGACATATTATATCCAAAAATTCTTCATACAGTGGACTACCAGTAAAATTGATAAAAAATTTGGAACCAAAAATTATTCAGACACTTTGACCTGACCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU177407 lncRNA downstream 192287 6076162 ~ 6077632 (-) True G156249
TU177376 lncRNA downstream 299704 5969997 ~ 5970215 (-) True G156222
TU177373 lncRNA downstream 312723 5956866 ~ 5957196 (-) True G156219
TU177365 lncRNA downstream 327252 5942432 ~ 5942667 (-) True G156211
TU175874 lncRNA downstream 412590 5857074 ~ 5857329 (-) True G154899
TU177449 lncRNA upstream 114641 6384761 ~ 6385009 (-) True G156285
TU177516 lncRNA upstream 268403 6538523 ~ 6539321 (-) True G156345
TU177528 lncRNA upstream 305607 6575727 ~ 6575986 (-) True G156357
TU177529 lncRNA upstream 307781 6577901 ~ 6578184 (-) True G156358
TU177530 lncRNA upstream 308141 6578261 ~ 6578493 (-) True G156359
CI01000029_06238355_06240993.mRNA mRNA downstream 28926 6238184 ~ 6240993 (-) True CI01000029_06238355_06240993
CI01000029_06166033_06201616.mRNA mRNA downstream 68303 6165961 ~ 6201616 (-) True CI01000029_06166033_06201616
CI01000029_06114050_06116816.mRNA mRNA downstream 153103 6113964 ~ 6116816 (-) True CI01000029_06114050_06116816
CI01000029_06099543_06110680.mRNA mRNA downstream 159239 6099528 ~ 6110680 (-) True CI01000029_06099543_06110680
CI01000029_06051592_06058664.mRNA mRNA downstream 210781 6050547 ~ 6059138 (-) True CI01000029_06051592_06058664
CI01000029_06283570_06287370.mRNA mRNA upstream 13259 6283379 ~ 6288267 (-) True CI01000029_06283570_06287370
CI01000029_06320111_06340400.mRNA mRNA upstream 49985 6320105 ~ 6340400 (-) True CI01000029_06320111_06340400
CI01000029_06406402_06408397.mRNA mRNA upstream 135949 6406069 ~ 6408397 (-) True CI01000029_06406402_06408397
CI01000029_06410464_06420256.mRNA mRNA upstream 139902 6410022 ~ 6420256 (-) True CI01000029_06410464_06420256
CI01000029_06431763_06439215.mRNA mRNA upstream 161600 6431720 ~ 6439215 (-) True CI01000029_06431763_06439215
TU175317 other downstream 1282494 4986108 ~ 4987425 (-) False G154415
TU175314 other downstream 1282494 4986185 ~ 4987425 (-) True G154415
TU175091 other downstream 1792707 4472400 ~ 4477212 (-) True G154201
TU174823 other downstream 2562667 3706223 ~ 3707252 (-) True CI01000029_03698769_03707177
TU174756 other downstream 2983365 3248777 ~ 3286554 (-) True G153891
TU177741 other upstream 900247 7170367 ~ 7170951 (-) False G156542
TU177684 other upstream 1096207 7366327 ~ 7369547 (-) False G156495
TU177685 other upstream 1096207 7366327 ~ 7369547 (-) False G156495

Expression Profile