Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000030_03765594_03778884.mRNA |
| length | 2036 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 2 |
| gene id | CI01000030_03765594_03778884 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000030 |
| NCBI id | null |
| chromosome length | 11638347 |
| location | 3765062 ~ 3779032 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| id | description |
|---|---|
| K08026 | ONECUT1, HNF6; one cut domain, family member 1 (hepatocyte nuclear factor 6) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU181053 | lncRNA | upstream | 1779 | 3763048 ~ 3763283 (+) | True | G159483 |
| TU181042 | lncRNA | upstream | 47602 | 3716945 ~ 3717460 (+) | True | CI01000030_03715463_03716370 |
| TU180957 | lncRNA | upstream | 60549 | 3697236 ~ 3701156 (+) | True | G159389 |
| TU181035 | lncRNA | upstream | 69773 | 3694956 ~ 3695289 (+) | True | G159465 |
| TU181034 | lncRNA | upstream | 70167 | 3694655 ~ 3694895 (+) | True | G159464 |
| TU181117 | lncRNA | downstream | 30392 | 3809424 ~ 3809647 (+) | True | G159545 |
| TU181118 | lncRNA | downstream | 30906 | 3809938 ~ 3810239 (+) | True | G159546 |
| TU181119 | lncRNA | downstream | 31701 | 3810733 ~ 3811214 (+) | True | G159547 |
| TU181120 | lncRNA | downstream | 32700 | 3811732 ~ 3811980 (+) | True | G159548 |
| TU181124 | lncRNA | downstream | 37730 | 3816762 ~ 3816999 (+) | True | G159552 |
| CI01000030_03744173_03745628.mRNA | mRNA | upstream | 19321 | 3743491 ~ 3745741 (+) | True | CI01000030_03744173_03745628 |
| CI01000030_03715463_03716370.mRNA | mRNA | upstream | 47493 | 3714611 ~ 3717569 (+) | False | CI01000030_03715463_03716370 |
| CI01000030_03703231_03704355.mRNA | mRNA | upstream | 60447 | 3702173 ~ 3704615 (+) | False | CI01000030_03703231_03704355 |
| CI01000030_03594936_03629403.mRNA | mRNA | upstream | 135577 | 3594936 ~ 3629485 (+) | True | CI01000030_03594936_03629403 |
| CI01000030_03580764_03584676.mRNA | mRNA | upstream | 179807 | 3580764 ~ 3585255 (+) | True | CI01000030_03580764_03584676 |
| CI01000030_03825765_03826754.mRNA | mRNA | downstream | 46383 | 3825415 ~ 3826794 (+) | True | CI01000030_03825765_03826754 |
| CI01000030_03838027_03838812.mRNA | mRNA | downstream | 57296 | 3836328 ~ 3840945 (+) | True | CI01000030_03838027_03838812 |
| CI01000030_03909138_03910046.mRNA | mRNA | downstream | 130006 | 3909038 ~ 3910046 (+) | True | CI01000030_03909138_03910046 |
| CI01000030_03915675_03916993.mRNA | mRNA | downstream | 136254 | 3915286 ~ 3916993 (+) | True | CI01000030_03915675_03916993 |
| CI01000030_03917423_03918481.mRNA | mRNA | downstream | 138391 | 3917423 ~ 3918674 (+) | True | CI01000030_03917423_03918481 |
| TU180187 | other | upstream | 721289 | 3013456 ~ 3013518 (+) | True | G158703 |
| TU179886 | other | upstream | 1150769 | 2595876 ~ 2614293 (+) | True | G158416 |
| TU179965 | other | upstream | 1482692 | 2279113 ~ 2279192 (+) | True | G158493 |
| TU179078 | other | upstream | 2126835 | 1636867 ~ 1638227 (+) | True | G157726 |
| TU178651 | other | upstream | 2758375 | 1003889 ~ 1006687 (+) | True | G157332 |
| TU181300 | other | downstream | 652768 | 4431800 ~ 4488526 (+) | True | G159685 |
| TU181432 | other | downstream | 737746 | 4516778 ~ 4517107 (+) | False | G159816 |
| TU183621 | other | downstream | 3420903 | 7199935 ~ 7200017 (+) | True | G161721 |
| TU183810 | other | downstream | 4075053 | 7854085 ~ 7859348 (+) | True | G161901 |
| TU184054 | other | downstream | 4458933 | 8237965 ~ 8239604 (+) | True | G162088 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00040483 | True | 1339 | mRNA | 0.57 | 2 | NC_007133.7 | 20461488 ~ 20473567 (+) |
