Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU222580 |
| length | 1640 |
| lncRNA type | sense_over |
| GC content | 0.30 |
| exon number | 1 |
| gene id | CI01000046_01963803_01965901 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 1963555 ~ 1968371 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU222660 | lncRNA | upstream | 4200 | 1962246 ~ 1962532 (+) | True | G196051 |
| TU222659 | lncRNA | upstream | 4973 | 1961219 ~ 1961759 (+) | True | G196050 |
| TU222568 | lncRNA | upstream | 7584 | 1888077 ~ 1959148 (+) | True | G195965 |
| TU222647 | lncRNA | upstream | 95752 | 1870698 ~ 1870980 (+) | True | G196038 |
| TU222644 | lncRNA | upstream | 99925 | 1866504 ~ 1866807 (+) | True | G196035 |
| TU222587 | lncRNA | downstream | 28752 | 1997123 ~ 1999094 (+) | True | G195978 |
| TU222569 | lncRNA | downstream | 67511 | 2035882 ~ 2036110 (+) | False | G195966 |
| TU222570 | lncRNA | downstream | 67511 | 2035882 ~ 2036110 (+) | False | G195966 |
| TU222571 | lncRNA | downstream | 67511 | 2035882 ~ 2036110 (+) | True | G195966 |
| TU222590 | lncRNA | downstream | 87699 | 2056070 ~ 2057016 (+) | True | G195981 |
| CI01000046_01933932_01935589.mRNA | mRNA | upstream | 28910 | 1932890 ~ 1937822 (+) | True | CI01000046_01933932_01935589 |
| CI01000046_01903950_01922429.mRNA | mRNA | upstream | 44293 | 1902090 ~ 1922439 (+) | True | CI01000046_01903950_01922429 |
| CI01000046_01865451_01881353.mRNA | mRNA | upstream | 85363 | 1865451 ~ 1881369 (+) | False | CI01000046_01865451_01881353 |
| CI01000046_01540075_01668012.mRNA | mRNA | upstream | 298720 | 1540075 ~ 1668012 (+) | False | CI01000046_01540075_01668012 |
| CI01000046_01318513_01343464.mRNA | mRNA | upstream | 622537 | 1316670 ~ 1344195 (+) | True | CI01000046_01318513_01343464 |
| CI01000046_01988070_01995034.mRNA | mRNA | downstream | 17949 | 1986320 ~ 1995330 (+) | True | CI01000046_01988070_01995034 |
| CI01000046_02006028_02024639.mRNA | mRNA | downstream | 37657 | 2006028 ~ 2024940 (+) | True | CI01000046_02006028_02024639 |
| CI01000046_02027256_02031337.mRNA | mRNA | downstream | 58783 | 2027154 ~ 2031451 (+) | True | CI01000046_02027256_02031337 |
| CI01000046_02037519_02037782.mRNA | mRNA | downstream | 69148 | 2037519 ~ 2039055 (+) | False | CI01000046_02037519_02037782 |
| CI01000046_02066859_02072868.mRNA | mRNA | downstream | 98488 | 2066859 ~ 2073014 (+) | True | CI01000046_02066859_02072868 |
| TU222567 | other | upstream | 7584 | 1872795 ~ 1959148 (+) | True | G195965 |
| TU222565 | other | upstream | 92031 | 1872795 ~ 1873083 (+) | False | G195965 |
| TU222216 | other | upstream | 403395 | 1542931 ~ 1563337 (+) | True | G195643 |
| TU221488 | other | upstream | 805042 | 1161157 ~ 1161690 (+) | True | G195003 |
| TU221152 | other | upstream | 1506387 | 458008 ~ 460345 (+) | True | G194721 |
| TU222725 | other | downstream | 471546 | 2439917 ~ 2440072 (+) | False | G196108 |
| TU223597 | other | downstream | 1218624 | 3186995 ~ 3194271 (+) | True | G196936 |
| TU223494 | other | downstream | 1975457 | 3943828 ~ 3945500 (+) | True | CI01000046_03943890_03945302 |
| TU223720 | other | downstream | 2181052 | 4149423 ~ 4149780 (+) | True | G197055 |
| TU223789 | other | downstream | 2402640 | 4371011 ~ 4371430 (+) | True | G197121 |
