RNA id: CI01000047_04213574_04213976.mRNA


Basic Information

Item Value
RNA id CI01000047_04213574_04213976.mRNA
length 450
RNA type mRNA
GC content 0.46
exon number 2
gene id CI01000047_04213574_04213976
representative False

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4213409 ~ 4214085 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATGGCCACTCCCAAGAACTCTTTTCTCAATCGCCGCAGGACACCAGGTTCCTCTGCCCGCTCTTCGGTCAGACGTGAGGCCCGGCTGGACAAAGTGCTGTCGGACATGAAGCGTCACAGAAAAATTGAGGAGCAGATTCTAAGGACAGGTCGTGACCTTTTTAAAAACGATAAATCGCGGCCAGGGCCTGCCGTCGAGCCGCCTCTATCGCCGAACAGTCAGCGAGAGCGGGAAAAAGAACGGGAAAGAGACAGTGACCCTAGCACTGTCTTCAGCCCCAGACAGAGGAGATACTGAGGGAAACAACAGACTGCTTGAACAAATTCCAGGTTTTTTAGGGTTTATACCCTAACTCATCATAATTCATCATTTTGCATTGGACAATGAGATGACCATATTTTACTGATGTTGTCTTTTTTTATTCAAAGATTTTTTAAAAATGTGAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230386 lncRNA downstream 36651 4130712 ~ 4176770 (-) True G202991
TU230392 lncRNA downstream 118529 4094355 ~ 4094892 (-) True G202997
TU230493 lncRNA downstream 119800 4093419 ~ 4093621 (-) True G203085
TU230492 lncRNA downstream 120010 4093178 ~ 4093411 (-) True G203084
TU230490 lncRNA downstream 121486 4091709 ~ 4091935 (-) True G203082
TU230556 lncRNA upstream 5421 4219397 ~ 4219733 (-) True G203143
TU230606 lncRNA upstream 194497 4408473 ~ 4408765 (-) False G203189
TU230605 lncRNA upstream 194565 4408541 ~ 4408765 (-) False G203189
TU230607 lncRNA upstream 194565 4408541 ~ 4408827 (-) True G203189
TU230610 lncRNA upstream 206183 4420159 ~ 4425359 (-) True G203191
CI01000047_04137872_04142531.mRNA mRNA downstream 70890 4137599 ~ 4142531 (-) True CI01000047_04137872_04142531
CI01000047_04128025_04134725.mRNA mRNA downstream 78696 4127902 ~ 4134725 (-) True CI01000047_04128025_04134725
CI01000047_04105620_04111019.mRNA mRNA downstream 102237 4105423 ~ 4111184 (-) True CI01000047_04105620_04111019
CI01000047_04022011_04032483.mRNA mRNA downstream 180755 4021745 ~ 4032666 (-) False CI01000047_04022011_04032483
CI01000047_03947036_03979744.mRNA mRNA downstream 233096 3946306 ~ 3980325 (-) True CI01000047_03947036_03979744
CI01000047_04285605_04286644.mRNA mRNA upstream 71251 4285227 ~ 4286694 (-) False CI01000047_04285605_04286644
CI01000047_04289186_04338565.mRNA mRNA upstream 75087 4289063 ~ 4339770 (-) True CI01000047_04289186_04338565
CI01000047_04345335_04375341.mRNA mRNA upstream 131151 4345127 ~ 4375434 (-) True CI01000047_04345335_04375341
CI01000047_04385029_04397861.mRNA mRNA upstream 170571 4384547 ~ 4397861 (-) True CI01000047_04385029_04397861
CI01000047_04398951_04431817.mRNA mRNA upstream 184975 4398951 ~ 4431817 (-) True CI01000047_04398951_04431817
TU230337 other downstream 227019 3985342 ~ 3986402 (-) True G202944
TU230047 other downstream 1079769 3132313 ~ 3133652 (-) False G202733
TU230052 other downstream 1079769 3132313 ~ 3133652 (-) True G202733
TU227734 other downstream 2497904 1706068 ~ 1715517 (-) True CI01000047_01708628_01744282
TU227498 other downstream 3378950 833941 ~ 834471 (-) True G200472
TU230539 other upstream 64932 4278908 ~ 4278976 (-) True G203126
TU230543 other upstream 360359 4576786 ~ 4576965 (-) True G203130
TU230719 other upstream 660403 4874379 ~ 4876734 (-) True G203286
TU231342 other upstream 1704532 5918508 ~ 5927344 (-) True G203840
TU231390 other upstream 1829277 6043253 ~ 6043789 (-) True G203881

Expression Profile