RNA id: TU282469


Basic Information

Item Value
RNA id TU282469
length 200
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G248895
representative True

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1381150 ~ 1381349 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTTTGTTTAAATTAAGGATTGCAGAAATGAGTACACCCTAGATTTAATTCAACAAATGTATAATATTCTAGCACTTAGTATGCCCTCCATAATTTTGAATATACTGCTCTGACCCTTCTTGGCACGGAGTGTACAAGTTCATGACAAATTGTCACATCTGTCCTGTTTAACTCCTGGATGATGAGCTCCTTAAATGCCCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU282457 lncRNA downstream 12758 1358590 ~ 1368392 (-) True G248885
TU282380 lncRNA downstream 50282 1311859 ~ 1330868 (-) True G248809
TU282364 lncRNA downstream 87515 1293601 ~ 1293635 (-) False G248794
TU282363 lncRNA downstream 87515 1293601 ~ 1293635 (-) False G248794
TU282365 lncRNA downstream 87515 1293601 ~ 1293635 (-) True G248794
TU282473 lncRNA upstream 19304 1400653 ~ 1400865 (-) True G248899
TU282475 lncRNA upstream 20189 1401538 ~ 1401742 (-) True G248901
TU282494 lncRNA upstream 50266 1431615 ~ 1434929 (-) False G248914
TU282493 lncRNA upstream 52221 1433570 ~ 1434929 (-) True G248914
TU282496 lncRNA upstream 65312 1446661 ~ 1498217 (-) True G248916
CI01000058_01360070_01364732.mRNA mRNA downstream 16418 1358642 ~ 1364732 (-) True CI01000058_01360070_01364732
CI01000058_01317202_01318789.mRNA mRNA downstream 60970 1317130 ~ 1320180 (-) True CI01000058_01317202_01318789
CI01000058_01292655_01293207.mRNA mRNA downstream 87943 1291986 ~ 1293207 (-) False CI01000058_01292655_01293207
CI01000058_01273319_01276576.mRNA mRNA downstream 104173 1273268 ~ 1276977 (-) True CI01000058_01273319_01276576
CI01000058_01143391_01218374.mRNA mRNA downstream 162776 1143344 ~ 1218374 (-) True CI01000058_01143391_01218374
CI01000058_01411383_01413893.mRNA mRNA upstream 29338 1410687 ~ 1414170 (-) True CI01000058_01411383_01413893
CI01000058_01418324_01423047.mRNA mRNA upstream 36148 1417497 ~ 1423527 (-) True CI01000058_01418324_01423047
CI01000058_01453383_01456154.mRNA mRNA upstream 71735 1453084 ~ 1456284 (-) True CI01000058_01453383_01456154
CI01000058_01462558_01465691.mRNA mRNA upstream 81174 1462523 ~ 1466129 (-) True CI01000058_01462558_01465691
CI01000058_01510773_01517931.mRNA mRNA upstream 129001 1510350 ~ 1519182 (-) True CI01000058_01510773_01517931
TU281026 other downstream 726201 646443 ~ 654949 (-) True G247592
TU282944 other upstream 1477134 2858483 ~ 2861193 (-) True CI01000058_02859435_02860658
TU283989 other upstream 2307294 3688643 ~ 3696711 (-) True G250230

Expression Profile