RNA id: TU282475



Basic Information


Item Value
RNA id TU282475
length 205
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G248901
representative True

Chromosome Information


Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1401538 ~ 1401742 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTAGTATATTATGTGTTTTATTAGACAGGTGAGCAACTGTTTGGATACATTCATAGACAGAAAACTAATCATTGCTATATAGCTCAACACAGTGAGTCTTATTGTTTGAATCTCTTTTTCTTGATTTACCGTGAGTACTATGTTTTACCATGCCTAATATCGATCTAGCTTACTGCAGTGTGCAACAAGTGTCTCATAGTAGCCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU282473 lncRNA downstream 673 1400653 ~ 1400865 (-) True G248899
TU282469 lncRNA downstream 20189 1381150 ~ 1381349 (-) True G248895
TU282457 lncRNA downstream 33146 1358590 ~ 1368392 (-) True G248885
TU282380 lncRNA downstream 70670 1311859 ~ 1330868 (-) True G248809
TU282363 lncRNA downstream 107903 1293601 ~ 1293635 (-) False G248794
TU282494 lncRNA upstream 29873 1431615 ~ 1434929 (-) False G248914
TU282493 lncRNA upstream 31828 1433570 ~ 1434929 (-) True G248914
TU282496 lncRNA upstream 44919 1446661 ~ 1498217 (-) True G248916
TU282533 lncRNA upstream 204196 1605938 ~ 1609817 (-) True G248943
TU282545 lncRNA upstream 215709 1617451 ~ 1617654 (-) True G248955
CI01000058_01360070_01364732.mRNA mRNA downstream 36806 1358642 ~ 1364732 (-) True CI01000058_01360070_01364732
CI01000058_01317202_01318789.mRNA mRNA downstream 81358 1317130 ~ 1320180 (-) True CI01000058_01317202_01318789
CI01000058_01292655_01293207.mRNA mRNA downstream 108331 1291986 ~ 1293207 (-) False CI01000058_01292655_01293207
CI01000058_01273319_01276576.mRNA mRNA downstream 124561 1273268 ~ 1276977 (-) True CI01000058_01273319_01276576
CI01000058_01143391_01218374.mRNA mRNA downstream 183164 1143344 ~ 1218374 (-) True CI01000058_01143391_01218374
CI01000058_01411383_01413893.mRNA mRNA upstream 8945 1410687 ~ 1414170 (-) True CI01000058_01411383_01413893
CI01000058_01418324_01423047.mRNA mRNA upstream 15755 1417497 ~ 1423527 (-) True CI01000058_01418324_01423047
CI01000058_01453383_01456154.mRNA mRNA upstream 51342 1453084 ~ 1456284 (-) True CI01000058_01453383_01456154
CI01000058_01462558_01465691.mRNA mRNA upstream 60781 1462523 ~ 1466129 (-) True CI01000058_01462558_01465691
CI01000058_01510773_01517931.mRNA mRNA upstream 108608 1510350 ~ 1519182 (-) True CI01000058_01510773_01517931
TU281026 other downstream 746589 646443 ~ 654949 (-) True G247592
TU282944 other upstream 1456741 2858483 ~ 2861193 (-) True CI01000058_02859435_02860658
TU283989 other upstream 2286901 3688643 ~ 3696711 (-) True G250230

Expression Profile