RNA id: TU319891


Basic Information

Item Value
RNA id TU319891
length 216
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G282217
representative True

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 3261100 ~ 3261315 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTTTTGAATAGCAAACAACTCTTACTGCACGCACCGCAACAGACTTAAAAATGGTGGTTGAAATAAACTGCTGCATGGAGTCAACCAATCAAAATGCTGCATGAACTCAACCAATCAGCATGTTCAGCGCCCAAGACTCACCCCCGAAAGTTACGGAACTTAGTAAAAGTACTTAAAAGTACTACTTCGTGAGCAGGTACTTTCTGAGGGGGAAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU319890 lncRNA upstream 725 3259976 ~ 3260375 (+) True G282216
TU319889 lncRNA upstream 1337 3259391 ~ 3259763 (+) True G282215
TU319888 lncRNA upstream 3011 3257802 ~ 3258089 (+) True G282214
TU319887 lncRNA upstream 3309 3257579 ~ 3257791 (+) True G282213
TU319886 lncRNA upstream 3543 3257260 ~ 3257557 (+) True G282212
TU319892 lncRNA downstream 2494 3263809 ~ 3264102 (+) True G282218
TU319893 lncRNA downstream 3507 3264822 ~ 3265306 (+) True G282219
TU319894 lncRNA downstream 4196 3265511 ~ 3265829 (+) True G282220
TU319895 lncRNA downstream 4910 3266225 ~ 3266456 (+) True G282221
TU319871 lncRNA downstream 14251 3275566 ~ 3277358 (+) True G282198
CI01000071_03108610_03108994.mRNA mRNA upstream 152106 3108444 ~ 3108994 (+) True CI01000071_03108610_03108994
CI01000071_03062277_03064334.mRNA mRNA upstream 196394 3061838 ~ 3064706 (+) True CI01000071_03062277_03064334
CI01000071_03016024_03022596.mRNA mRNA upstream 238106 3014670 ~ 3022994 (+) True CI01000071_03016024_03022596
CI01000071_02960341_02966088.mRNA mRNA upstream 294654 2960037 ~ 2966446 (+) True CI01000071_02960341_02966088
CI01000071_02927971_02953988.mRNA mRNA upstream 306933 2926649 ~ 2954167 (+) True CI01000071_02927971_02953988
CI01000071_03329447_03356262.mRNA mRNA downstream 68132 3329447 ~ 3357152 (+) True CI01000071_03329447_03356262
CI01000071_03361493_03387786.mRNA mRNA downstream 100178 3361493 ~ 3387878 (+) False CI01000071_03361493_03387786
CI01000071_03414821_03439810.mRNA mRNA downstream 153506 3414821 ~ 3439810 (+) True CI01000071_03414821_03439810
CI01000071_03756518_03756925.mRNA mRNA downstream 493441 3754756 ~ 3757404 (+) True CI01000071_03756518_03756925
CI01000071_03793473_03817709.mRNA mRNA downstream 531403 3792718 ~ 3819100 (+) True CI01000071_03793473_03817709
TU319744 other upstream 204569 3056084 ~ 3056531 (+) True G282080
TU319630 other upstream 432496 2804644 ~ 2804806 (+) True G281974
TU318234 other upstream 1883430 1375724 ~ 1375792 (+) True G280680
TU317961 other upstream 2339004 905217 ~ 922096 (+) True G280443
TU318001 other upstream 2457783 799775 ~ 799876 (+) True G280464

Expression Profile