RNA id: TU324150


Basic Information

Item Value
RNA id TU324150
length 246
lncRNA type antisense_over
GC content 0.41
exon number 1
gene id G286016
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 2571278 ~ 2571523 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAAAAGATCCATATTTAACAAGTCATGAAGTAAAATATCTAGCTTCCACCAGACCGCCTTCCGTATTCAAATTACAAAAAAAAACAGAACTGGTGTTGGCGCGTCAGTTAAGCTTTTTCCCCTAAGTTGAACAGGGAAGGCATAGGACGCAGCGTAAGCTTTTTGAACTGCGAGAGGCATGGCGCTTTCTTCCTAAGTTGAATATGGAAGGCGGTCTGGCGGAAGCTAGATATTTTACTTCATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU324214 lncRNA downstream 125678 2445183 ~ 2445600 (-) True G286080
TU324210 lncRNA downstream 168358 2402601 ~ 2402920 (-) True G286076
TU324208 lncRNA downstream 186519 2384549 ~ 2384759 (-) True G286074
TU324204 lncRNA downstream 190110 2380926 ~ 2381168 (-) True G286070
TU324202 lncRNA downstream 190945 2379770 ~ 2380333 (-) True G286068
TU324239 lncRNA upstream 77012 2648535 ~ 2648989 (-) True G286099
TU324245 lncRNA upstream 103189 2674712 ~ 2676873 (-) True G286105
TU324267 lncRNA upstream 303840 2875363 ~ 2875660 (-) True G286127
TU324268 lncRNA upstream 304158 2875681 ~ 2876025 (-) True G286128
TU324274 lncRNA upstream 329452 2900975 ~ 2901187 (-) True G286134
CI01000072_02561995_02567695.mRNA mRNA downstream 2921 2561440 ~ 2568357 (-) True CI01000072_02561995_02567695
CI01000072_02540610_02559153.mRNA mRNA downstream 12125 2540605 ~ 2559153 (-) True CI01000072_02540610_02559153
CI01000072_02536049_02537741.mRNA mRNA downstream 33537 2535202 ~ 2537741 (-) True CI01000072_02536049_02537741
CI01000072_02528257_02532888.mRNA mRNA downstream 38390 2528076 ~ 2532888 (-) True CI01000072_02528257_02532888
CI01000072_02508225_02525505.mRNA mRNA downstream 45517 2507653 ~ 2525761 (-) True CI01000072_02508225_02525505
CI01000072_02572648_02594029.mRNA mRNA upstream 1125 2572648 ~ 2594029 (-) True CI01000072_02572648_02594029
CI01000072_02617680_02621357.mRNA mRNA upstream 45786 2617309 ~ 2621534 (-) True CI01000072_02617680_02621357
CI01000072_02628853_02630214.mRNA mRNA upstream 56560 2628083 ~ 2630214 (-) True CI01000072_02628853_02630214
CI01000072_02633510_02645090.mRNA mRNA upstream 61314 2632837 ~ 2645392 (-) True CI01000072_02633510_02645090
CI01000072_02653471_02758823.mRNA mRNA upstream 81948 2653471 ~ 2758823 (-) True CI01000072_02653471_02758823
TU323875 other downstream 400620 2168048 ~ 2170658 (-) True G285752
TU323892 other downstream 562969 2005551 ~ 2008309 (-) True G285766
TU323812 other downstream 943383 1602289 ~ 1602443 (-) True G285697
TU323815 other downstream 943383 1594111 ~ 1627895 (-) True CI01000072_01596829_01610605
TU323625 other downstream 1216346 1335507 ~ 1354932 (-) True G285534
TU324139 other upstream 422246 2993769 ~ 2999495 (-) True G286005
TU324361 other upstream 1398747 3970270 ~ 3976002 (-) False G286205
TU324366 other upstream 1398747 3970270 ~ 3976067 (-) False G286205
TU324367 other upstream 1398747 3970270 ~ 3976002 (-) False G286205
TU324368 other upstream 1398747 3970270 ~ 3976002 (-) False G286205

Expression Profile