Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00019054 |
| length | 1143 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 1 |
| gene id | XLOC_008761 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 42230088 ~ 42231230 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00019049 | lncRNA | upstream | 4367 | 42219583 ~ 42225721 (+) | False | XLOC_008760 |
| TCONS_00019048 | lncRNA | upstream | 4367 | 42219583 ~ 42225721 (+) | False | XLOC_008760 |
| TCONS_00019047 | lncRNA | upstream | 4367 | 42219583 ~ 42225721 (+) | False | XLOC_008760 |
| TCONS_00019050 | lncRNA | upstream | 4367 | 42221874 ~ 42225721 (+) | False | XLOC_008760 |
| TCONS_00019051 | lncRNA | upstream | 4367 | 42221887 ~ 42225721 (+) | False | XLOC_008760 |
| TCONS_00017413 | lncRNA | downstream | 31471 | 42262701 ~ 42280759 (+) | True | XLOC_008763 |
| TCONS_00017416 | lncRNA | downstream | 54489 | 42285719 ~ 42287226 (+) | False | XLOC_008764 |
| TCONS_00017417 | lncRNA | downstream | 81641 | 42312871 ~ 42317340 (+) | True | XLOC_008764 |
| TCONS_00019055 | lncRNA | downstream | 364394 | 42595624 ~ 42597390 (+) | True | XLOC_008768 |
| TCONS_00018792 | lncRNA | downstream | 760170 | 42991400 ~ 42991648 (+) | True | XLOC_008771 |
| TCONS_00017407 | mRNA | upstream | 284582 | 41932069 ~ 41945506 (+) | False | XLOC_008757 |
| TCONS_00017409 | mRNA | upstream | 286699 | 41932853 ~ 41943389 (+) | False | XLOC_008757 |
| TCONS_00017408 | mRNA | upstream | 286699 | 41932853 ~ 41943389 (+) | True | XLOC_008757 |
| TCONS_00017405 | mRNA | upstream | 299028 | 41919484 ~ 41931060 (+) | False | XLOC_008756 |
| TCONS_00017406 | mRNA | upstream | 299617 | 41919518 ~ 41930471 (+) | True | XLOC_008756 |
| TCONS_00017412 | mRNA | downstream | 4219 | 42235449 ~ 42255867 (+) | False | XLOC_008762 |
| TCONS_00017411 | mRNA | downstream | 4219 | 42235449 ~ 42255867 (+) | True | XLOC_008762 |
| TCONS_00017415 | mRNA | downstream | 54413 | 42285643 ~ 42347209 (+) | False | XLOC_008764 |
| TCONS_00017419 | mRNA | downstream | 165895 | 42397125 ~ 42551156 (+) | False | XLOC_008766 |
| TCONS_00017421 | mRNA | downstream | 199968 | 42431198 ~ 42551156 (+) | False | XLOC_008766 |
| TCONS_00017383 | other | upstream | 2909854 | 39320120 ~ 39320234 (+) | True | XLOC_008735 |
| TCONS_00017353 | other | upstream | 4633015 | 37589787 ~ 37597073 (+) | True | XLOC_008706 |
| TCONS_00017349 | other | upstream | 4649253 | 37580721 ~ 37580835 (+) | True | XLOC_008705 |
| TCONS_00017310 | other | upstream | 6957047 | 35272927 ~ 35273041 (+) | True | XLOC_008681 |
| TCONS_00017290 | other | upstream | 7657024 | 34568755 ~ 34573064 (+) | False | XLOC_008669 |
| TCONS_00017414 | other | downstream | 54413 | 42285643 ~ 42317342 (+) | False | XLOC_008764 |
| TCONS_00017418 | other | downstream | 83398 | 42314628 ~ 42314755 (+) | True | XLOC_008765 |
| TCONS_00017438 | other | downstream | 1598159 | 43829389 ~ 43829517 (+) | True | XLOC_008779 |
| TCONS_00017459 | other | downstream | 2630053 | 44861283 ~ 44861399 (+) | True | XLOC_008797 |
| TCONS_00017469 | other | downstream | 3383060 | 45614290 ~ 45614569 (+) | True | XLOC_008807 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000225_00207653_00208420.mRNA | True | 897 | mRNA | 0.59 | 1 | CI01000225 | 207653 ~ 208549 (+) |
