RNA id: TU423596


Basic Information

Item Value
RNA id TU423596
length 1637
lncRNA type antisense_over
GC content 0.42
exon number 4
gene id G370950
representative False

Chromosome Information

Item Value
chromosome id CI01000168
NCBI id null
chromosome length 1293618
location 1162126 ~ 1167426 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTTTAAGAACATGTTTTATGTTTATTAAATCAAATCCATATTTGACATACATATTCATTTAACTTCAGAAGTTTACAGTTTTATCATCAGTTTCCCAGTAGTCTTAGCCAAATAATTTTGCATTTTATTTATAAGAGTTGGTTTAGACAACAAAAATGGTACAAAACTACATAAAGAACTCCCTGTGTGAAGAAACTGAAGAGAGAGAGAAGAAAAATAAATTGGGCCTACCCTGCCTAAACATTTAAAAACACACCAGAAAAATCTGCAAAAGTAACTAAGCAGTCATTTTTATCACTTTACCAGCATCAGGTTTAAATATGTGCCACGGAGGTTGTTGGCATAACTAAATGTGATAATGAGCAGTGAATATGGCATGAAATGTGTTTGCCGTGACAGTTCCTGACATTTTACGTCAGTGGCTACTGTACTGACTTTTTCCATTTGCTCACAACAATGGCTTTATTATAGCTTAATTACAAAATGCTATTTCAAACAATCCTAAATCTTTCATTGGGGGAACACCTAACATCACCTTTACTTCATTCTCGTAGTAATGTGCAATTGTAACAGTACTGGAGAAAAAAAAAACACCAAGCAAAAAAAAAAAATAGAAAGATGCCTGATCCAAATAAACGCACACAAGTTGGGCTAAAACAAAATCAATGAATTAATTTGTAACCGAACTTGCACCCTTTACCAAAACAAACAATGAAGAGATTTACAAGTGGGGCAAATGAAAACAAAAAGACTTGTGGACTAGCGAACAACCAAGTTCTTCTGATCTCTGTTGAATTGGACATCCAATTCGTGAAACTGGTAAATCACGGACTCAATGTGTTTATGTTGAGGGTTTTTATACGACTCTCCGCACTTCAAAGAATCTCTTCAGGTAGTAAATCTGTCCGAGGGTCATGGCCACCAGCACCAGAGCCTCAAAGAAGGACCACAGCACCACCCTGCTGTTCGTGTTGTCATTGACTAATTATTTTAATATCAAATAATAGGCTGGTTGATCACATGATCAGTGAGGAGGATGTCTTACTTGCGCGGTGTATTCTCTCTCGGACCTCCATGTATTCCTGCTCATGTTTGACCGCCGTCATGGCAACCGCCAGCTCATTGATCATCTCCTCCAGCTTATTCTGATACCCTCTGTCTCCATGTCCTGTCCTTTGGGCGCCTCGCCGATGTCGATGGTGAACATCACGATCTTAGGGGTCATGGTGGACATCTTGTTGCTGAAGCAGAACTTGTAGGTTCCGTCCATATGGGCGGCTACAGAATACTTCCCACTGGACTCACGGTCTCCTTTATAGATCTGCTTCCCATCCGGACCTGTACCTCCACGTCGATGTCCAGAAAACCTCCCTCGGCGACCTCAAACATCAGGCCCATCTTCGTGCCCGAGTTCACGCGCTCATAGAAACACTCCTCCGCGTGCGCGTCTATGCTCACAAAATAGCCGCTCGCCGTGTAAGACAGCGCGCAGAGGAGCACGACTAGTTCCGAGAACGTAAACATGTTTGGTGCGGTGTATTAATGGAGGATAAAACCCATAAAAGAGACTTTACGCCGCACGGCACCGATTAAGGCGGAGACTGACAAGCGCTAGCTGCGCTACTGATGATGCCACG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU423638 lncRNA downstream 118445 1042636 ~ 1043681 (-) True G370979
TU423640 lncRNA downstream 141231 1015060 ~ 1020895 (-) True G370981
TU423645 lncRNA downstream 232622 922253 ~ 929504 (-) True G370986
TU423627 lncRNA downstream 390873 770590 ~ 771253 (-) True G370968
TU423636 lncRNA downstream 406827 750495 ~ 755299 (-) True G370977
TU423725 lncRNA upstream 94136 1261562 ~ 1281486 (-) True G371046
CI01000168_01151161_01160955.mRNA mRNA downstream 1171 1150969 ~ 1160955 (-) True CI01000168_01151161_01160955
CI01000168_01121464_01135373.mRNA mRNA downstream 26753 1120757 ~ 1135373 (-) True CI01000168_01121464_01135373
CI01000168_01110611_01115503.mRNA mRNA downstream 46503 1109835 ~ 1115623 (-) True CI01000168_01110611_01115503
CI01000168_01097284_01099844.mRNA mRNA downstream 62282 1097094 ~ 1099844 (-) True CI01000168_01097284_01099844
CI01000168_01023228_01030414.mRNA mRNA downstream 131213 1022405 ~ 1030913 (-) True CI01000168_01023228_01030414
CI01000168_01202307_01215499.mRNA mRNA upstream 34365 1201791 ~ 1215499 (-) True CI01000168_01202307_01215499
CI01000168_01222730_01228035.mRNA mRNA upstream 55059 1222485 ~ 1228035 (-) True CI01000168_01222730_01228035
CI01000168_01250022_01255577.mRNA mRNA upstream 82546 1249972 ~ 1255577 (-) True CI01000168_01250022_01255577
CI01000168_01266573_01268627.mRNA mRNA upstream 99135 1266561 ~ 1268627 (-) True CI01000168_01266573_01268627
TU423608 other downstream 340105 818571 ~ 822021 (-) True G370953

Expression Profile