RNA id: TU423638


Basic Information

Item Value
RNA id TU423638
length 1046
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G370979
representative True

Chromosome Information

Item Value
chromosome id CI01000168
NCBI id null
chromosome length 1293618
location 1042636 ~ 1043681 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CATTATAAAAAATCTAGTCATTTTACAGTGGAAATAATAACTACAGTATTTTGTTTTAGCAGAAACTAGCAGATAATTTTTCTGTAAAGGAATAATAATAGTGTTATGCACATATAGAAACCCATATAAACCGTGTGTAATGTAACATCAGTTGTTTTGTTTCTGTTGTAATAAAGATTATCTAGTTAAAAATGCTCAAGTCTACATACTGAAGCAGGATCCAAATAGTTGACCCCGGTCAAGAGAATTTACTGAATGGATCAGACGATAACATGTCAGGAAGGATGGATTGCACACGCACTCAGTCCGTTCTGTCCTCTCTCGAATGGAATTCAAAGTGAAATCAGGAATCTCGCTGTGATAAAAACAACACTATCTCTTTCTCACCCCGTTCTCTTGTCACGGAGCCCGAGGGCAACGTGCCTGCCTGTTGCCATGGAGACGTAATAGTTTTCCTTCCTGTAATGTGATATGTCTTATCAGGTTCAGGTCGAAAAAAAATTCTTCTCAGCTTTTTTATTTCATGCATCGTTAAACGTTTTTGAGCGCTTTGCACAGAAGGCACGTCAGCGTCACCTCGTCCATACATCAAAGTGTGAGGAAGCAGCTGGAAGCATGGCTTTAATAAAGCGCTTTGTTTTTCTTTTACACACTTTTAACAGTTTAATATCCGCCTTAATTCAACGCTCAGAGTTCAGACACAAACGCCTTCGAAGTGACAGAGCTGCTCTGATCCAGTCGTGATGTGACACGTCATCTACGGGCGATTCTTCAGTCAGCACTGCGTTTTAATCAGTAGTGCTTTATATAAAATTAAAAAAAAATGGGCCTTGCCATTTTAGAGGATTATAATAGCTTTAAATGTCTGATTATATCTCTTTAAATAGTATTACTTAATTTTTAAGTGTTGAAGTGTTACATTTGCCAGGATTTCTCAATTTTGAGTTTATCCTAGACTTTTTAATTTCCCCTCTATAATAAATGTATATATTTACGAAACATTTTTCTTTTGCATGTTGAACATATTTACTTATTTTAACGTATTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU423640 lncRNA downstream 21741 1015060 ~ 1020895 (-) True G370981
TU423645 lncRNA downstream 113132 922253 ~ 929504 (-) True G370986
TU423627 lncRNA downstream 271383 770590 ~ 771253 (-) True G370968
TU423636 lncRNA downstream 287337 750495 ~ 755299 (-) True G370977
TU423678 lncRNA downstream 292434 749980 ~ 750202 (-) True G371004
TU423594 lncRNA upstream 118445 1162126 ~ 1163202 (-) False G370950
TU423596 lncRNA upstream 118445 1162126 ~ 1167426 (-) False G370950
TU423598 lncRNA upstream 119075 1162756 ~ 1167426 (-) True G370950
TU423725 lncRNA upstream 217881 1261562 ~ 1281486 (-) True G371046
CI01000168_01023228_01030414.mRNA mRNA downstream 11723 1022405 ~ 1030913 (-) True CI01000168_01023228_01030414
CI01000168_00969712_01008179.mRNA mRNA downstream 32866 969572 ~ 1009770 (-) True CI01000168_00969712_01008179
CI01000168_00934568_00949104.mRNA mRNA downstream 93532 934230 ~ 949104 (-) True CI01000168_00934568_00949104
CI01000168_00869412_00895047.mRNA mRNA downstream 147589 869325 ~ 895047 (-) True CI01000168_00869412_00895047
CI01000168_00824417_00835917.mRNA mRNA downstream 206719 823728 ~ 835917 (-) True CI01000168_00824417_00835917
CI01000168_01097284_01099844.mRNA mRNA upstream 53413 1097094 ~ 1099844 (-) True CI01000168_01097284_01099844
CI01000168_01110611_01115503.mRNA mRNA upstream 66154 1109835 ~ 1115623 (-) True CI01000168_01110611_01115503
CI01000168_01121464_01135373.mRNA mRNA upstream 77076 1120757 ~ 1135373 (-) True CI01000168_01121464_01135373
CI01000168_01151161_01160955.mRNA mRNA upstream 107288 1150969 ~ 1160955 (-) True CI01000168_01151161_01160955
CI01000168_01202307_01215499.mRNA mRNA upstream 158110 1201791 ~ 1215499 (-) True CI01000168_01202307_01215499
TU423608 other downstream 220615 818571 ~ 822021 (-) True G370953

Expression Profile