RNA id: TU436862



Basic Information


Item Value
RNA id TU436862
length 241
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G382136
representative True

Chromosome Information


Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 4049313 ~ 4049553 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTATACTGGATTTATTTTGTGATAATGACCGATTGATTAGTGTACATTATCCCACCAGTGTTACCAAGTTTCGCTAGAGGTTTGGAAACGTCCAAAACAAGTGACCCTCGCAGTCTATGGCACCTCTTTGAAAGTGATTTTGTTACAGTTTTCTATTATGTTCTGCCAAAACAATGATCCTTTTTTATTCCCTGAATCGTTTCCCATACACAAATAGCTTACAGCACAATACCATAATGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU436861 lncRNA downstream 85 4048885 ~ 4049228 (-) True G382135
TU436860 lncRNA downstream 946 4047949 ~ 4048367 (-) True G382134
TU436859 lncRNA downstream 1750 4047263 ~ 4047563 (-) True G382133
TU436858 lncRNA downstream 3617 4045237 ~ 4045696 (-) True G382132
TU436770 lncRNA downstream 4314 4040541 ~ 4044999 (-) True G382051
TU436863 lncRNA upstream 3716 4053269 ~ 4053492 (-) True G382137
TU436894 lncRNA upstream 122966 4172519 ~ 4178416 (-) True G382166
TU436952 lncRNA upstream 292555 4342108 ~ 4346215 (-) True G382201
TU436944 lncRNA upstream 486005 4535558 ~ 4540944 (-) False G382198
TU436942 lncRNA upstream 491635 4541188 ~ 4567288 (-) False G382198
CI01000189_04017195_04030340.mRNA mRNA downstream 18973 4017021 ~ 4030340 (-) True CI01000189_04017195_04030340
CI01000189_03983572_04013988.mRNA mRNA downstream 35180 3982366 ~ 4014133 (-) True CI01000189_03983572_04013988
CI01000189_03980640_03981210.mRNA mRNA downstream 68103 3980613 ~ 3981210 (-) True CI01000189_03980640_03981210
CI01000189_03950993_03958722.mRNA mRNA downstream 90591 3950173 ~ 3958722 (-) True CI01000189_03950993_03958722
CI01000189_03903426_03904603.mRNA mRNA downstream 144710 3902934 ~ 3904603 (-) True CI01000189_03903426_03904603
CI01000189_04058639_04097730.mRNA mRNA upstream 8373 4057926 ~ 4097730 (-) True CI01000189_04058639_04097730
CI01000189_04120947_04130707.mRNA mRNA upstream 70784 4120337 ~ 4130707 (-) True CI01000189_04120947_04130707
CI01000189_04271632_04393877.mRNA mRNA upstream 222079 4271632 ~ 4393877 (-) True CI01000189_04271632_04393877
CI01000189_04432088_04472364.mRNA mRNA upstream 382381 4431934 ~ 4472706 (-) True CI01000189_04432088_04472364
CI01000189_04572894_04573508.mRNA mRNA upstream 523306 4572859 ~ 4573653 (-) True CI01000189_04572894_04573508
TU436773 other downstream 156404 3885562 ~ 3892909 (-) True G382052
TU436781 other downstream 216700 3830627 ~ 3832613 (-) True G382060
TU435927 other downstream 1042869 2998873 ~ 3006444 (-) True G381317
TU435899 other downstream 1085859 2959108 ~ 2961667 (-) True G381299
TU434639 other downstream 3150873 894220 ~ 898440 (-) True G380177
TU436879 other upstream 96037 4145590 ~ 4146084 (-) True G382153

Expression Profile