Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00019630 |
| length | 837 |
| RNA type | nonsense_mediated_decay |
| GC content | 0.48 |
| exon number | 6 |
| gene id | XLOC_009830 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 19029297 ~ 19151800 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0035556 | intracellular signal transduction | biological_process |
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0005085 | guanyl-nucleotide exchange factor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-061215-2 | Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to act upstream of or within small GTPase mediated signal transduction. Orthologous to human RAPGEF5 (Rap guanine nucleotide exchange factor 5). |
| ensembl_id | ENSDART00000137107 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00021704 | lncRNA | upstream | 514287 | 18550523 ~ 18551058 (+) | True | XLOC_009827 |
| TCONS_00019622 | lncRNA | upstream | 524446 | 18535656 ~ 18540899 (+) | False | XLOC_009827 |
| TCONS_00021703 | lncRNA | upstream | 553146 | 18502566 ~ 18512199 (+) | True | XLOC_009826 |
| TCONS_00021912 | lncRNA | upstream | 1394888 | 17669300 ~ 17670457 (+) | True | XLOC_009821 |
| TCONS_00021702 | lncRNA | upstream | 1398414 | 17665784 ~ 17666931 (+) | True | XLOC_009820 |
| TCONS_00021914 | lncRNA | downstream | 2894 | 19131365 ~ 19151800 (+) | True | XLOC_009830 |
| TCONS_00021915 | lncRNA | downstream | 247163 | 19375634 ~ 19412421 (+) | False | XLOC_009831 |
| TCONS_00021916 | lncRNA | downstream | 247235 | 19375706 ~ 19412421 (+) | True | XLOC_009831 |
| TCONS_00021705 | lncRNA | downstream | 252395 | 19380866 ~ 19381292 (+) | True | XLOC_009832 |
| TCONS_00021917 | lncRNA | downstream | 380267 | 19508738 ~ 19513991 (+) | True | XLOC_009833 |
| TCONS_00019626 | mRNA | upstream | 42229 | 19014886 ~ 19023116 (+) | True | XLOC_009829 |
| TCONS_00019625 | mRNA | upstream | 47046 | 19013257 ~ 19018299 (+) | False | XLOC_009829 |
| TCONS_00019624 | mRNA | upstream | 51882 | 19013018 ~ 19013463 (+) | False | XLOC_009829 |
| TCONS_00019623 | mRNA | upstream | 66796 | 18974064 ~ 18998549 (+) | True | XLOC_009828 |
| TCONS_00019620 | mRNA | upstream | 492470 | 18534834 ~ 18572875 (+) | False | XLOC_009827 |
| TCONS_00019632 | mRNA | downstream | 408143 | 19536614 ~ 19538772 (+) | False | XLOC_009834 |
| TCONS_00019633 | mRNA | downstream | 408168 | 19536639 ~ 19538772 (+) | False | XLOC_009834 |
| TCONS_00019634 | mRNA | downstream | 408290 | 19536761 ~ 19537851 (+) | False | XLOC_009834 |
| TCONS_00019635 | mRNA | downstream | 408602 | 19537073 ~ 19538776 (+) | True | XLOC_009834 |
| TCONS_00019636 | mRNA | downstream | 508913 | 19637384 ~ 19646960 (+) | False | XLOC_009835 |
| TCONS_00019610 | other | upstream | 1494411 | 17570810 ~ 17570934 (+) | True | XLOC_009818 |
| TCONS_00019609 | other | upstream | 1548263 | 17516948 ~ 17517082 (+) | True | XLOC_009816 |
| TCONS_00019587 | other | upstream | 2910887 | 16154324 ~ 16154458 (+) | True | XLOC_009803 |
| TCONS_00019585 | other | upstream | 3198180 | 15866224 ~ 15867165 (+) | True | XLOC_009800 |
| TCONS_00019534 | other | upstream | 5623712 | 13424548 ~ 13441633 (+) | False | XLOC_009767 |
| TCONS_00019642 | other | downstream | 575953 | 19704424 ~ 19704538 (+) | True | XLOC_009838 |
| TCONS_00019651 | other | downstream | 1039363 | 20167834 ~ 20170828 (+) | True | XLOC_009843 |
| TCONS_00019655 | other | downstream | 1168352 | 20296823 ~ 20304275 (+) | True | XLOC_009845 |
| TCONS_00019658 | other | downstream | 1368302 | 20496773 ~ 20504865 (+) | True | XLOC_009846 |
| TCONS_00019667 | other | downstream | 1784942 | 20913413 ~ 20913484 (+) | True | XLOC_009854 |
