RNA id: CI01000353_00266578_00266780.mRNA


Basic Information

Item Value
RNA id CI01000353_00266578_00266780.mRNA
length 290
RNA type mRNA
GC content 0.39
exon number 1
gene id CI01000353_00266578_00266780
representative True

Chromosome Information

Item Value
chromosome id CI01000353
NCBI id null
chromosome length 2149660
location 266578 ~ 266867 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTTCTGCTTTCACATGCCCTGGACAGGCTGCTTTACCCTCTGATGAACAAACGAAACCAGTGATTGTTAGTACATTCTATTTCACTGCGAAAAGAGGCACATCATTTAAAATAATCTATGTCAACCTAACATTCACAAACCAGAGCTTCATCCAAGTCCACACAGACTATTTCCTCTCTACGGTTATGACGACAAAACCATAAGCACGTGATATGACCAAGTCAGATAGAGGGTGGAAAACAGTAAACGGTAATGTCAAGTTAAACTACAATTTTTTTTTTAGTGAACGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU586897 lncRNA upstream 98596 167724 ~ 167982 (+) True G511840
TU586830 lncRNA upstream 99205 69315 ~ 167373 (+) True G511776
TU586827 lncRNA upstream 202799 63548 ~ 63779 (+) True G511775
TU586806 lncRNA upstream 207954 26516 ~ 58624 (+) True G511754
TU586949 lncRNA downstream 25194 292061 ~ 292286 (+) True G511883
TU586970 lncRNA downstream 120850 387717 ~ 388048 (+) True G511901
TU587038 lncRNA downstream 272564 539431 ~ 539661 (+) True G511959
TU587016 lncRNA downstream 291449 558316 ~ 561812 (+) True G511938
TU587020 lncRNA downstream 318448 585315 ~ 586406 (+) True G511941
CI01000353_00019814_00020188.mRNA mRNA upstream 245654 19814 ~ 20924 (+) True CI01000353_00019814_00020188
CI01000353_00313956_00315335.mRNA mRNA downstream 47089 313956 ~ 315734 (+) True CI01000353_00313956_00315335
CI01000353_00319014_00320138.mRNA mRNA downstream 51917 318784 ~ 320772 (+) True CI01000353_00319014_00320138
CI01000353_00323864_00325448.mRNA mRNA downstream 56418 323285 ~ 325897 (+) True CI01000353_00323864_00325448
CI01000353_00329672_00331600.mRNA mRNA downstream 62673 329540 ~ 332088 (+) True CI01000353_00329672_00331600
CI01000353_00334136_00335255.mRNA mRNA downstream 66850 333717 ~ 336048 (+) True CI01000353_00334136_00335255
TU586951 other downstream 30780 297647 ~ 536588 (+) True G511885
TU587078 other downstream 578741 845608 ~ 864243 (+) True CI01000353_00818227_00860645
TU587885 other downstream 1158804 1425671 ~ 1425927 (+) True G512683
TU587883 other downstream 1158930 1425797 ~ 1425927 (+) False G512683
TU587884 other downstream 1158930 1425797 ~ 1425927 (+) True G512683

Expression Profile