RNA id: TCONS_00021256


Basic Information

Item Value
RNA id TCONS_00021256
length 538
RNA type processed_transcript
GC content 0.48
exon number 4
gene id XLOC_010862
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 34300279 ~ 34306670 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAGACACTGGAATAGCTTAGACTTGGACTTTTTTTGCAACATGGAATCAAGAACTACTCTGATCTTCATTTGTACCATGTGGACAACTCTCCTAGAAGGATGGGGGTTGCCTGTAGTGCCACAGACTGACCTGAATGACCCGTCTGCAAACCATAGGGTCAGGAGCAAACGTTGTTCCTGCAACAACCAGATGGACTCCGAATGCCACTATTTCTGCCATCTGGACATCATCTGGGTGAACACGCCAAGTAAGACCACTGTGTATGGATTGGGAAGTCCATTGTCTCGTCGGAGGAGATCTACAGGCCGCTGTTCATGTGCTAACCCTGCGGATCGAACGTGCAAAAGTTTCTGCCACTACAGCTCTGAAAACCCGGCCATCATACTGGTGCACCCATCTCAGCCTGAACATAAGAAACTGGAACAACCCAAAATAGATCACCCAATCGCTCTCAACAGTGGAAATGCCAGTcctgaagttcagattttagGGAAACCTTCTTCTTTTGGGGCTCGATCTGATGCCATAACCTTCCTT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000140858

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00022198 lncRNA downstream 257798 34039521 ~ 34044379 (-) True XLOC_010859
TCONS_00022197 lncRNA downstream 565418 33735328 ~ 33736759 (-) True XLOC_010855
TCONS_00022196 lncRNA downstream 709597 33587815 ~ 33592580 (-) True XLOC_010853
TCONS_00021242 lncRNA downstream 710071 33582868 ~ 33592106 (-) False XLOC_010853
TCONS_00021241 lncRNA downstream 710174 33582868 ~ 33592003 (-) False XLOC_010853
TCONS_00021815 lncRNA upstream 251695 34557672 ~ 34565488 (-) False XLOC_010866
TCONS_00022199 lncRNA upstream 251881 34557858 ~ 34561503 (-) False XLOC_010866
TCONS_00022200 lncRNA upstream 355083 34661060 ~ 34886237 (-) False XLOC_010867
TCONS_00022201 lncRNA upstream 389791 34695768 ~ 34886227 (-) False XLOC_010867
TCONS_00022202 lncRNA upstream 397417 34703394 ~ 34875906 (-) False XLOC_010867
TCONS_00021252 mRNA downstream 17071 34199297 ~ 34285106 (-) False XLOC_010861
TCONS_00021254 mRNA downstream 43246 34234112 ~ 34258931 (-) True XLOC_010861
TCONS_00021253 mRNA downstream 89265 34205195 ~ 34212912 (-) False XLOC_010861
TCONS_00021251 mRNA downstream 107175 34185613 ~ 34195002 (-) True XLOC_010860
TCONS_00021249 mRNA downstream 371418 33925812 ~ 33930759 (-) False XLOC_010858
TCONS_00021257 mRNA upstream 15417 34321394 ~ 34338537 (-) False XLOC_010863
TCONS_00021258 mRNA upstream 16332 34322309 ~ 34401412 (-) False XLOC_010863
TCONS_00021261 mRNA upstream 153089 34459066 ~ 34477805 (-) True XLOC_010865
TCONS_00021267 mRNA upstream 610185 34916162 ~ 35329803 (-) False XLOC_010868
TCONS_00021270 mRNA upstream 610320 34916297 ~ 35330001 (-) False XLOC_010868
TCONS_00021244 other downstream 543892 33750067 ~ 33758285 (-) True XLOC_010856
TCONS_00021239 other downstream 760219 33515766 ~ 33541958 (-) True XLOC_010852
TCONS_00021237 other downstream 1197270 33103883 ~ 33104907 (-) False XLOC_010851
TCONS_00021210 other downstream 1652373 32630074 ~ 32649804 (-) False XLOC_010844
TCONS_00021209 other downstream 1727941 32574110 ~ 32574236 (-) True XLOC_010842
TCONS_00021259 other upstream 45968 34351945 ~ 34352061 (-) True XLOC_010864
TCONS_00021260 other upstream 94829 34400806 ~ 34425561 (-) True XLOC_010863
TCONS_00021262 other upstream 251039 34557016 ~ 34564953 (-) False XLOC_010866
TCONS_00021264 other upstream 251039 34557016 ~ 34565638 (-) False XLOC_010866
TCONS_00021263 other upstream 251039 34557016 ~ 34565638 (-) False XLOC_010866

Expression Profile

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