RNA id: TU805116



Basic Information


Item Value
RNA id TU805116
length 202
lncRNA type inter_gene
GC content 0.19
exon number 1
gene id G683859
representative True

Chromosome Information


Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 6867977 ~ 6868178 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTTTACTGTCAGGAGTACAGGGAATATATTATATAAACATTGTAAGGACAAATCAAAATTTATTTAAAAATGTAATCAAATCAGTTCATAAAACTAACAATTTAGTTTAAAATGTAATCAAATAATATAATTATTTAAATAAATTAATAATAATAATATTAATAAGTAGGCTACATTTTTACTGTGCAATTTCTGTCATTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU805099 lncRNA downstream 18395 6824079 ~ 6849582 (-) True G683843
TU804945 lncRNA downstream 45624 6819921 ~ 6822353 (-) True G683693
TU805082 lncRNA downstream 53894 6813573 ~ 6814083 (-) True G683829
TU805061 lncRNA downstream 185675 6682024 ~ 6682302 (-) True G683808
TU804937 lncRNA downstream 221142 6645481 ~ 6646835 (-) True G683685
TU805119 lncRNA upstream 5195 6873373 ~ 6873646 (-) True G683862
TU805125 lncRNA upstream 44810 6912988 ~ 6913375 (-) True G683868
TU805093 lncRNA upstream 47523 6915701 ~ 6917817 (-) True G683838
TU805142 lncRNA upstream 106291 6974469 ~ 6974681 (-) True G683885
TU805143 lncRNA upstream 108207 6976385 ~ 6976610 (-) True G683886
CI01180000_06854398_06859861.mRNA mRNA downstream 8116 6854296 ~ 6859861 (-) True CI01180000_06854398_06859861
CI01180000_06801398_06808587.mRNA mRNA downstream 59190 6801090 ~ 6808787 (-) True CI01180000_06801398_06808587
CI01180000_06764688_06798535.mRNA mRNA downstream 69442 6763899 ~ 6798535 (-) True CI01180000_06764688_06798535
CI01180000_06738893_06754819.mRNA mRNA downstream 113158 6738450 ~ 6754819 (-) True CI01180000_06738893_06754819
CI01180000_06663465_06695698.mRNA mRNA downstream 172279 6663144 ~ 6695698 (-) True CI01180000_06663465_06695698
CI01180000_06893062_06910960.mRNA mRNA upstream 24518 6892696 ~ 6910960 (-) True CI01180000_06893062_06910960
CI01180000_06936274_06938957.mRNA mRNA upstream 68085 6936263 ~ 6938957 (-) True CI01180000_06936274_06938957
CI01180000_06956161_06961385.mRNA mRNA upstream 87983 6956161 ~ 6961385 (-) True CI01180000_06956161_06961385
CI01180000_06984285_06989850.mRNA mRNA upstream 115315 6983493 ~ 6990671 (-) True CI01180000_06984285_06989850
CI01180000_07045235_07052218.mRNA mRNA upstream 176287 7044465 ~ 7052320 (-) True CI01180000_07045235_07052218
TU804922 other downstream 105133 6762075 ~ 6762844 (-) True G683673
TU804519 other downstream 1112451 5751044 ~ 5755526 (-) False G683294
TU804622 other downstream 1248706 5618207 ~ 5619271 (-) True G683394
TU804315 other downstream 2070135 4796260 ~ 4797842 (-) True CI01180000_04796238_04797552
TU801483 other downstream 3623020 3244350 ~ 3244957 (-) True G680603
TU805291 other upstream 534969 7403147 ~ 7413132 (-) False G684018
TU805292 other upstream 535806 7403984 ~ 7413132 (-) True G684018
TU805347 other upstream 638712 7506890 ~ 7525654 (-) True G684071
TU805357 other upstream 711226 7579404 ~ 7582803 (-) True G684080
TU805466 other upstream 1042583 7910761 ~ 7911208 (-) False G684182

Expression Profile