Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00024985 |
| length | 3056 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 4 |
| gene id | XLOC_012339 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007128.7 |
| NCBI id | CM002901.2 |
| chromosome length | 53461100 |
| location | 44482087 ~ 44498625 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0048731 | system development | biological_process |
| GO:0048738 | cardiac muscle tissue development | biological_process |
| GO:0048468 | cell development | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0030154 | cell differentiation | biological_process |
| GO:0010927 | cellular component assembly involved in morphogenesis | biological_process |
| GO:0048513 | animal organ development | biological_process |
| GO:0055001 | muscle cell development | biological_process |
| GO:0055002 | striated muscle cell development | biological_process |
| GO:0014866 | skeletal myofibril assembly | biological_process |
| GO:0055006 | cardiac cell development | biological_process |
| GO:0055007 | cardiac muscle cell differentiation | biological_process |
| GO:0055013 | cardiac muscle cell development | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0009888 | tissue development | biological_process |
| GO:0031032 | actomyosin structure organization | biological_process |
| GO:0031033 | myosin filament organization | biological_process |
| GO:0031034 | myosin filament assembly | biological_process |
| GO:0035051 | cardiocyte differentiation | biological_process |
| GO:0007010 | cytoskeleton organization | biological_process |
| GO:0009653 | anatomical structure morphogenesis | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0045214 | sarcomere organization | biological_process |
| GO:0097435 | supramolecular fiber organization | biological_process |
| GO:0030239 | myofibril assembly | biological_process |
| GO:0030240 | skeletal muscle thin filament assembly | biological_process |
| GO:0030241 | skeletal muscle myosin thick filament assembly | biological_process |
| GO:0048869 | cellular developmental process | biological_process |
| GO:0032989 | cellular component morphogenesis | biological_process |
| GO:0071688 | striated muscle myosin thick filament assembly | biological_process |
| GO:0070925 | organelle assembly | biological_process |
| GO:0048646 | anatomical structure formation involved in morphogenesis | biological_process |
| GO:0030029 | actin filament-based process | biological_process |
| GO:0030036 | actin cytoskeleton organization | biological_process |
| GO:0061061 | muscle structure development | biological_process |
| GO:0032501 | multicellular organismal process | biological_process |
| GO:0032502 | developmental process | biological_process |
| GO:0060537 | muscle tissue development | biological_process |
| GO:0014706 | striated muscle tissue development | biological_process |
| GO:0062023 | collagen-containing extracellular matrix | cellular_component |
| GO:0005901 | caveola | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00024266 | lncRNA | downstream | 72464 | 44354824 ~ 44409623 (-) | True | XLOC_012336 |
| TCONS_00024982 | lncRNA | downstream | 126101 | 44354824 ~ 44355986 (-) | False | XLOC_012336 |
| TCONS_00024262 | lncRNA | downstream | 366010 | 44070341 ~ 44116077 (-) | True | XLOC_012334 |
| TCONS_00024981 | lncRNA | downstream | 366119 | 44070341 ~ 44115968 (-) | False | XLOC_012334 |
| TCONS_00024258 | lncRNA | downstream | 471205 | 44004439 ~ 44010882 (-) | True | XLOC_012332 |
| TCONS_00024986 | lncRNA | upstream | 187981 | 44686138 ~ 44687306 (-) | False | XLOC_012341 |
| TCONS_00024987 | lncRNA | upstream | 187981 | 44686138 ~ 44688930 (-) | True | XLOC_012341 |
| TCONS_00024552 | lncRNA | upstream | 468799 | 44966956 ~ 44974388 (-) | True | XLOC_012344 |
| TCONS_00024988 | lncRNA | upstream | 748926 | 45247083 ~ 45254515 (-) | True | XLOC_012350 |
| TCONS_00024989 | lncRNA | upstream | 950912 | 45449069 ~ 45452533 (-) | False | XLOC_012353 |
| TCONS_00024268 | mRNA | downstream | 41255 | 44413770 ~ 44440832 (-) | True | XLOC_012338 |
| TCONS_00024267 | mRNA | downstream | 79374 | 44399360 ~ 44402713 (-) | True | XLOC_012337 |
| TCONS_00024265 | mRNA | downstream | 232367 | 44245999 ~ 44249720 (-) | True | XLOC_012335 |
| TCONS_00024264 | mRNA | downstream | 232549 | 44244715 ~ 44249538 (-) | False | XLOC_012335 |
| TCONS_00024263 | mRNA | downstream | 234380 | 44244659 ~ 44247707 (-) | False | XLOC_012335 |
| TCONS_00024270 | mRNA | upstream | 4550 | 44502707 ~ 44584811 (-) | False | XLOC_012340 |
| TCONS_00024271 | mRNA | upstream | 4550 | 44502707 ~ 44584938 (-) | True | XLOC_012340 |
| TCONS_00024272 | mRNA | upstream | 269568 | 44767725 ~ 44776224 (-) | True | XLOC_012342 |
| TCONS_00024273 | mRNA | upstream | 463751 | 44961908 ~ 44968407 (-) | False | XLOC_012343 |
| TCONS_00024274 | mRNA | upstream | 463795 | 44961952 ~ 44968177 (-) | True | XLOC_012343 |
| TCONS_00024261 | other | downstream | 423160 | 44058811 ~ 44058927 (-) | True | XLOC_012333 |
| TCONS_00024257 | other | downstream | 618463 | 43850762 ~ 43863624 (-) | True | XLOC_012331 |
| TCONS_00024224 | other | downstream | 1639224 | 42825291 ~ 42842863 (-) | True | XLOC_012313 |
| TCONS_00024191 | other | downstream | 4840289 | 39641681 ~ 39641798 (-) | True | XLOC_012284 |
| TCONS_00024190 | other | downstream | 4950158 | 39531815 ~ 39531929 (-) | True | XLOC_012283 |
| TCONS_00024283 | other | upstream | 642172 | 45140329 ~ 45151793 (-) | False | XLOC_012349 |
| TCONS_00024305 | other | upstream | 2171850 | 46670007 ~ 46670103 (-) | True | XLOC_012361 |
| TCONS_00024306 | other | upstream | 2242049 | 46740206 ~ 46740303 (-) | True | XLOC_012364 |
| TCONS_00024308 | other | upstream | 2321591 | 46819748 ~ 46819845 (-) | True | XLOC_012370 |
| TCONS_00024319 | other | upstream | 3012123 | 47510280 ~ 47510396 (-) | True | XLOC_012384 |
