RNA id: TCONS_00024319


Basic Information

Item Value
RNA id TCONS_00024319
length 117
RNA type rRNA
GC content 0.48
exon number 1
gene id XLOC_012384
representative True

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 47510280 ~ 47510396 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TATTACCCTCATATCACCCTGCATCcaaagaccggttactcactgaagctaagcagggctgagcctggttagtatctggatgggagactacaagggaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000174892

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00025005 lncRNA downstream 65348 47441637 ~ 47444932 (-) True XLOC_012383
TCONS_00025004 lncRNA downstream 383391 47123399 ~ 47126889 (-) True XLOC_012381
TCONS_00024554 lncRNA downstream 383512 47123352 ~ 47126768 (-) False XLOC_012381
TCONS_00025003 lncRNA downstream 420642 47085010 ~ 47089638 (-) True XLOC_012379
TCONS_00024313 lncRNA downstream 530790 46978855 ~ 46979490 (-) True XLOC_012377
TCONS_00025006 lncRNA upstream 885266 48395662 ~ 48397443 (-) True XLOC_012386
TCONS_00025007 lncRNA upstream 966899 48477295 ~ 48484420 (-) True XLOC_012387
TCONS_00024321 lncRNA upstream 975912 48486308 ~ 48501268 (-) False XLOC_012388
TCONS_00024322 lncRNA upstream 980735 48491131 ~ 48504225 (-) False XLOC_012388
TCONS_00024555 lncRNA upstream 981119 48491515 ~ 48502518 (-) False XLOC_012388
TCONS_00024317 mRNA downstream 205246 47187870 ~ 47305034 (-) False XLOC_012382
TCONS_00024318 mRNA downstream 289346 47193206 ~ 47220934 (-) True XLOC_012382
TCONS_00024316 mRNA downstream 368031 47086682 ~ 47142249 (-) True XLOC_012380
TCONS_00024315 mRNA downstream 419840 47083446 ~ 47090440 (-) False XLOC_012379
TCONS_00024314 mRNA downstream 520277 46989113 ~ 46990003 (-) True XLOC_012378
TCONS_00024325 mRNA upstream 1173373 48683769 ~ 48705993 (-) True XLOC_012391
TCONS_00024326 mRNA upstream 1225764 48736160 ~ 48743076 (-) True XLOC_012392
TCONS_00024327 mRNA upstream 1235344 48745740 ~ 48805159 (-) True XLOC_012393
TCONS_00024328 mRNA upstream 1395948 48906344 ~ 48915427 (-) True XLOC_012394
TCONS_00024329 mRNA upstream 1410403 48920799 ~ 48936123 (-) True XLOC_012396
TCONS_00024308 other downstream 690435 46819748 ~ 46819845 (-) True XLOC_012370
TCONS_00024306 other downstream 769977 46740206 ~ 46740303 (-) True XLOC_012364
TCONS_00024305 other downstream 840177 46670007 ~ 46670103 (-) True XLOC_012361
TCONS_00024283 other downstream 2358487 45140329 ~ 45151793 (-) False XLOC_012349
TCONS_00024269 other downstream 3026663 44483490 ~ 44483617 (-) False XLOC_012339
TCONS_00024320 other upstream 652555 48162951 ~ 48163065 (-) True XLOC_012385
TCONS_00024334 other upstream 1716808 49227204 ~ 49227319 (-) True XLOC_012399
TCONS_00024342 other upstream 1893666 49404062 ~ 49407046 (-) True XLOC_012402
TCONS_00024346 other upstream 1940781 49451177 ~ 49451298 (-) True XLOC_012405
TCONS_00024355 other upstream 2344011 49854407 ~ 49860935 (-) True XLOC_012412

Expression Profile

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