Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00024325 |
| length | 1949 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 5 |
| gene id | XLOC_012391 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007128.7 |
| NCBI id | CM002901.2 |
| chromosome length | 53461100 |
| location | 48683769 ~ 48705993 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0071805 | potassium ion transmembrane transport | biological_process |
| GO:0006811 | ion transport | biological_process |
| GO:0030322 | stabilization of membrane potential | biological_process |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0022841 | potassium ion leak channel activity | molecular_function |
| GO:0005267 | potassium channel activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-051113-112 | Enables potassium channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including eye; gill; heart; integument; and pleuroperitoneal region. Orthologous to human KCNK5 (potassium two pore domain channel subfamily K member 5). |
| ensembl_id | ENSDART00000030934 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00025009 | lncRNA | downstream | 75622 | 48607713 ~ 48608147 (-) | True | XLOC_012390 |
| TCONS_00025008 | lncRNA | downstream | 75674 | 48607713 ~ 48608095 (-) | False | XLOC_012390 |
| TCONS_00024324 | lncRNA | downstream | 108412 | 48574770 ~ 48575357 (-) | True | XLOC_012389 |
| TCONS_00024323 | lncRNA | downstream | 179440 | 48491714 ~ 48504329 (-) | True | XLOC_012388 |
| TCONS_00024322 | lncRNA | downstream | 179544 | 48491131 ~ 48504225 (-) | False | XLOC_012388 |
| TCONS_00025010 | lncRNA | upstream | 210493 | 48916486 ~ 48917885 (-) | False | XLOC_012395 |
| TCONS_00025013 | lncRNA | upstream | 210493 | 48916486 ~ 48918914 (-) | False | XLOC_012395 |
| TCONS_00025012 | lncRNA | upstream | 210493 | 48916486 ~ 48918914 (-) | False | XLOC_012395 |
| TCONS_00025011 | lncRNA | upstream | 210493 | 48916486 ~ 48918914 (-) | True | XLOC_012395 |
| TCONS_00024336 | lncRNA | upstream | 621251 | 49327244 ~ 49329761 (-) | False | XLOC_012400 |
| TCONS_00024317 | mRNA | downstream | 1378735 | 47187870 ~ 47305034 (-) | False | XLOC_012382 |
| TCONS_00024318 | mRNA | downstream | 1462835 | 47193206 ~ 47220934 (-) | True | XLOC_012382 |
| TCONS_00024316 | mRNA | downstream | 1541520 | 47086682 ~ 47142249 (-) | True | XLOC_012380 |
| TCONS_00024315 | mRNA | downstream | 1593329 | 47083446 ~ 47090440 (-) | False | XLOC_012379 |
| TCONS_00024314 | mRNA | downstream | 1693766 | 46989113 ~ 46990003 (-) | True | XLOC_012378 |
| TCONS_00024326 | mRNA | upstream | 30167 | 48736160 ~ 48743076 (-) | True | XLOC_012392 |
| TCONS_00024327 | mRNA | upstream | 39747 | 48745740 ~ 48805159 (-) | True | XLOC_012393 |
| TCONS_00024328 | mRNA | upstream | 200351 | 48906344 ~ 48915427 (-) | True | XLOC_012394 |
| TCONS_00024329 | mRNA | upstream | 214806 | 48920799 ~ 48936123 (-) | True | XLOC_012396 |
| TCONS_00024330 | mRNA | upstream | 237211 | 48943204 ~ 48944465 (-) | True | XLOC_012397 |
| TCONS_00024320 | other | downstream | 520704 | 48162951 ~ 48163065 (-) | True | XLOC_012385 |
| TCONS_00024319 | other | downstream | 1173373 | 47510280 ~ 47510396 (-) | True | XLOC_012384 |
| TCONS_00024308 | other | downstream | 1863924 | 46819748 ~ 46819845 (-) | True | XLOC_012370 |
| TCONS_00024306 | other | downstream | 1943466 | 46740206 ~ 46740303 (-) | True | XLOC_012364 |
| TCONS_00024305 | other | downstream | 2013666 | 46670007 ~ 46670103 (-) | True | XLOC_012361 |
| TCONS_00024334 | other | upstream | 521211 | 49227204 ~ 49227319 (-) | True | XLOC_012399 |
| TCONS_00024342 | other | upstream | 698069 | 49404062 ~ 49407046 (-) | True | XLOC_012402 |
| TCONS_00024346 | other | upstream | 745184 | 49451177 ~ 49451298 (-) | True | XLOC_012405 |
| TCONS_00024355 | other | upstream | 1148414 | 49854407 ~ 49860935 (-) | True | XLOC_012412 |
| TCONS_00024357 | other | upstream | 1277165 | 49983158 ~ 49995353 (-) | False | XLOC_012413 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000310_02482727_02513419.mRNA | True | 2566 | mRNA | 0.40 | 5 | CI01000310 | 2482069 ~ 2513779 (+) |
