XLOC_012412 (col12a1a)


Basic Information

Item Value
gene id XLOC_012412
gene name col12a1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 49785495 ~ 49978986 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024352
ATTTCGTCAGGGAGTAAAAGTTGGGAACAACCCCCTATTTAGTGTCAGGTTGTGCTGAGAAACCTCCCATTCTCTCCTAGGCTTTCCCTCAGTGCTGGAGCAGCGAGTCTGACTGCAGGACATCGGCTTTACATCTCTGAGACCCGCGCAGTTTTACAGATTAAGTAATGAGctgctgactgtgtgtgtgtaaacatgaagatcaggTTGTCTTTGGCCGCTGCTGCGCTCTTGACTCTAGTACTCAGTTCAGTAGAGGCTCAAGTGGAGCCTCCGTCAGACTTAAAATTTAAAATCCTGAATGAAAACACAGTGCAAATGTCATGGAGGAAGCCCTCGTCTCAGATACAGGGCTACAGAATACAGGTCACGTCAGATACAGATGATTCTAAAGAATTGAGTCTTCCTGCCTCGTCCACAAGCACATCAATTACAGATCTAACTCCAGATGTAGACTATTCAGTGTCAATCAATTCATATGATGGTGCTGAAGAAAGTATCCCTATCCTTGGACAAATCACAATTCAATCCAGCAACACAAGTGGACCAAGGAGGCCACAGTCAGAGGCTGTCAAGTGTTCAGTGAGTGCCGTTGCGGATCTGGTTTTCCTGGTGGACGGCTCTTGGAGTGTGGGAAGAGAAAACTTTAGATTTATCCGGAGTTTCATTGGGGCCATGGCCGGGGCCTTCGACATTGAAGAGGATAAGACCAGAGTGGCTGTGGTTCAGTACAGCTCGGACACCAGGACAGAGTTCAGTCTAAACACACATTTCAGACGACCCGATGTCCTGCGAGCCATTAAAAATCTGCCGTACAAGGGTGGAAATACCATGACGGGTGATGCAATGGACTATCTGGTGAAAAACACGTTCACTCAGGCGGCTGGAGCCAGGAAAGGCTTCCCAAAAGTGGCCATGATCATCACAGATGGAAAATCTCAAGACCCCGTAGAGGAGTACGCCGAACGGTTGAGGAACATCGGAGTGGAGATCTTTGTGCTGGGTATCAAAGGAGCAGATGAGGACGAGCTGAAGGAGATCGCCTCCAGACCCCATAGCAAGCATGTCTATAACGTCCCCAACTTCGACATGATCAATCAGGTCCAGAAGGCGCTCATCACTGAAGTTTGCTCTGGCGTGGAGGAGCAGCTAAATTCCCTTGTAAGCGGGGAGGAAGTTGTCGAACCAGCTTCCAACCTCAGAGTGACAGATATCTCCTCCAAATCCATGAGAATTGCGTGGGATTCATCTCCTGGTGATATCACAGGCTATAAGCTGCAGGTTTTTCCCACTATTGCGAGCGCCAAAAAGCAGGAGCTCTACACTGGGCCCACGATGACCTTGGCCAATGTCAGAGACCTGACGCCTGAGATGGAGTATGAGATCAGTCTGTTTGCTCTCAAAGGTCTGACTCCTAGTGTGCCGCAAGTTGTCACTGAGAAAACTCAGCCAGTGAAAGTATTTACAGAGTGTTCCCTAGAGGTGGATGTCCAAGCTGACATTGTCCTCCTGGTGGATGGGTCATATAGTATAGGACTGCCTAACTTTGCGAAGGTTAGAGCTTTCCTCGAAGTACTTGTGAATTCTTTTGACATCGGACCTAACAAAGTGCAGATCAGCTTGGTTCAGTACAGCAGGGATCCTCACACTGAGTTCGCCTTGAATAAATTCGATGACAATGCAGCCATGGTCAAGGCGGTCCGCACCTTCCCCTACCGAGGTGGATCCACCAACACCGGCAAGGCCATGACATATGTGAGGGAAAAGATCTTTGTTTCGGGCCGTGGCGCTCGTGATAACGTCCCCCGAGTCATGGTGCTTATCACAGACGGCAAGTCCTCAGATTCTTTCAAAGACCCCGCCAACAAACTGAGGGATACAGATGTGGAGATTTTTGCAGTGGGAGTAAAAGATGCCGTACGATCTGAGCTGGAGGCTATCGCCAATGTTCCTGCTGATAACCATGTGTTTGAGGTGGAGGACTTTGATGCTTTCGAGCGGATCTCCAAGGAGCTGACCGCGTCCATCTGCCTCAGAATTGAGCAGGAGCTCCATAACATCAGGAAAAGAAGTTTGCTTCCCCCAAAGTCACTGAGCTTCTCTGAGGTGACCTCCAGGAGTTTCAGGACCTCATGGGTTTCTGATGGAGAGGATATCCTGTCTTTTCTGGTGCGCTTCAGGCCAGCGGCGGACCTAACTGGAGACTACATCTCTCTGGTGGTTCCCCATGACATCACCAGTACAATTCTGCCCAATCTCACGCCACTCACCACCTACGAAGTTAACGTCATTGCTCAGTATGATAAAGGAGACAGCTTTCCTTTGACGGGCGAGGAGACCACTTTAGAAGAGTTGGGTTCTGTTCGTAACCTGATGGTGAGCGAGGAGGCTGTGGACCGCTTTCGGGTGTCGTGGAGAGCTGCTCCAGGATTAGTGCTGAGGTACAGACTGCTCTACGAGCCTGTGAGCGGAGGGGATAAACTGGAAGCAGAGACTGATGGGAATCAGGTCACCACTGTGCTCAATGAACTACTACCGGTCACTACTTACCGGGTCACCGTTTACCCTGAGTACGCAAGTGGAAGGGGTCCCTCCATGGACACTGAAGGCACCACCAAAGAAGTTCGAGGTTCTCCACGCGACTTAAGGGTCTTCAATGAGACGGTGTCTAGCATGAGGGTCTCGTGGCGGGCTGCCCCAGGCAACGTGCTTCAATATCAGGTGGCCTACAAACCTGACGGTGGGGAGAGGAAAGAAATAAGTGTTAAAGGAGAGACAACAACTGCTGTGCTGAAAAATCTGCTGCCGGACACGGAGTATGAGCTGTTTGTTAGCGCACGTTACGTCTCTGGACTTGGCGCACCACTTATGGGAACAGGCACCACGCTGGAAGAACTTGGTTCACCTTCGAATCTGGTAACTTCAGACGTCACTGAGAACAGTTTTGTAGCATCCTGGACCGCCGCCCCTGGAAACGTCCGTCTTTATCGGGTCACCTGGAAATCCCTCTTTTCAGAGGAAGCTGGCGAGAAGACTGTCCCCGGGGACGTAACCACCACTGTTCTGGACGGGCTGACACCAGAGACCCGCTACAAGGTTTCTGTCTACGCTGTCTACAGCCGTGCGGAGGGGGCGCCACTGCACGGAGAGGAGACCACAGATGTGTCGGCCGCTACCAGAGCTCTTACGGTGTCAGAAGAAACAGAGAGGACCATGAAGGTGACATGGATACCAGCACCTGGCAATGTTGTCAATTACAGGGTATCATACAAACCTCAGGGTGATTTACGCCAAATGGCCTCCAAAGCACCAGGAGGCACCAATTCTATAGTCCTGAGACGCCTGATCCCCCAGACCACTTACGATATCACAGTGGTTCCCGTCTACAAGTTTGGGGATGGAAGACAAAGGCAAGGAGAAGGAACTACATTGTCTCAATATAAAGCTCCCAGAAACTTGCAAACTTCGGAGCCCACTAAAACCAGTTTCAGGGTGACCTGGGATCATGCTCCTGGAGATGTAAAAGGCTACAAGGTCACTTTCCATCCCACCGGAAAGGAAGTGGACCTGGGAGAGTTACTCGTAGGCCCCTATGACAACACTGTGGTTCTGGAGGAACTAAGGGCCGGCACTAAGTATACGGTAAATGTGTTTGGTATGTTTGATGGAGGAGAGAGTATGCCATTGGCTGGAGAGGAGAAGACCACCCTCTCTGACGCAGCTTCTGAAAACCTCCCTTATACACCTTCAGATGCCCAGTGTAAAACCACGGCCCAAGCGGATATCGTCCTGCTTGTTGATGGATCTTGGAGCATTGGTCGCCTGAACTTCAAGACCATACGCAATTTCATTGCTCGCATGGTGGGAGTCTTCGACATCGGCCCCGATCGTGTCCAGATTGGTCTGGCACAGTACAGCGGAGACCCGAAGACTGAGTGGCATCTCAATGCTCACAGAACCAGGACTCAGCTGCTGGATGCGGTGGCCAATCTACCCTACAAAGGAGGAAACACTCTCACCGGCCTTGCTTTGAATTACATCCTTCAGAATAACTTCAAGCCTAACGTTGGCATGCGTCCAAACTCCAGAAAGATCGGCGTCCTGGTCACTGATGGCAAGTCCCAAGACGACATTGTGGCGAACTCACAGAACCTGCGGGACCAAGGGATTGAACTGTACGCCATTGGTGTAAAGAACGCAGATGAGAATGAGTTGAGAACCATTGCTTCCGATCCCGATGACATTCACATGTACAACGTGGCTGATTTCTCCTTCCTGCTGGACATTGTGGATGACCTCACAAACAACCTGTGCAACAGCGTCAAAGGTCCAGGAGGAGGACCAGAGCCACCCACTGATCTGACCACCTCAGAGGTCACACATTACTCTTTCCGTGCCACTTGGGTGGCTCCTGACGGGCCTGTGGAGAAGTACAGAGTGGAGTATGTGAGCACCGCTGGAGGAGAACCACAGCAACAGATGTTTGTGGACGGGACGGTGACCACTGTGGTTTTGGAAGGTCTCACTCCGCTGACCGAGTACATAGTAAAGGTTTACTCAGTGGTGGGAGAGGACAGCAGCGACCCACTCAGAGGCATAGAGACCACATTGCCTCTTCCTCCATCCGGTGAGTTGAGGATTACCGATGTGACCCACAGCACCATGCAGCTGGACTGGGACGCTGCGCCCGGCGCCGTCCGAAAGTACATCATCACTTACAAGCCAGAGGAGGGAGAGGCGAAGGAGCTTGAAGTTGACGGAGATGTAACATCTAGAGGCCTGGATAATCTCATCTCCCAGACTGAATATGATGTGGCTGTGACTCCGGTTTATGATTCGGGCACTGGAAACCCCATGCTTAACCAGGCCATTACAGATGTGGTTCCTGCCCCGCAGAACTTGAGGTTCTCGATGGTGACCCAGACCAGTTTTAGGGTTCACTGGGAGCACGGCGCTCCTGATGTCTCCCTCTACCGTATTGGCTGGAAAAAGAAAGGAACGACCGAGTTTCAAAATGATATCCTGAGTAGTGAAGACACTACATATGATCTGGTGGACCTGGAGCCAGACACACCTTATGATGTTTCGGTCACTGCCATTTACCCTGATGAGTCTGAGAGCGAGGATCTGCTGGGCACTGAACGCACTTTGGCCAAGCTTGCTACACCACCTCCCAGTGGTCCTCCTCAAAACCTCCAGGTGTTCGACGAGACCACCACCTCCCTCACGACTAAGTGGGACCACGCGCCTGGACGAGTTCAGAACTACAAAATCACCTACGTACCGCTTACTGGAGGACGATCACAGTcgACGCAGGTCGGAGGAAAGAAAAACACAGTGATCCTGCAGAAACTGACTCCAGACACTCCTTACTCCATCACTGTTGCTGCGGTCTACGCCAGCGGAGAGGCCAGAGACATTTCTGGCCAAGGAAAGACATTGCCGCTGGGCAGTGTCAGGAATCTTCAGGTCACTGACCCCACAGTTAGCACTCTGAATGTGCGCTGGGAGCCGGCGGAGGGAAGCGTTCGCCAGTACAGGATCTACTACCAGCCCGTCGCAGGGGGCGCAGAGGACATGGTCCAGGTTCCTGGAAGCACCACCAGCACCGTTCTGAAGAACCTGCAATCTGACACTCAGTACAGAGTGACGGTGGTGCCAGTCTACGCTCCTGGAGAGGGCAAGCGCATGTCGGAGACCGGAAAAACACTGGTTCGGACCCCTGCCAAGAACATCCAGGTTTACAACCCCACCACAAACACCCTGAACGTGCGCTGGGAGCCGGCCTCAGGACAGGTGCAGCAGTACCGCGTGGCTTACGCCCCTCTCTCCGGGATCCGACCCTCTCAGTCGGTGCTGGTTCCAGGAAACACCCACACGGCTCTGCTGCAGCAGCTGGAATCAGACACTGACTACTCTGTGAGTGTGGTGGCTCTGTATGCTGATGGAGAGGGCTCGTCTGTGTCTGATAATGGCAAAACACTGCCCCGCAGTGGCCCCAGGAACCTGCGGGTTTATGATCCCACCACCAGCACGCTGTCGGTGGGCTGGGAACATGCAGAAGGGCCTGTGATTCAGTACCGCATTGGCTACGCACCCACCACTGGAGATCCCATTGAAGAATTTACAACTGTCCCAGGCAACCGTAACTCGGTCATCCTGCAAAACCTGCAGCCAGACACGCCGTACAACATCAACGTAGAAGCCATTTATCAAGATGGCCCTGGAGGACGACTCAGTGGAGATGGAAAAACATTGGATCTCCTTGGGCCTCGTAACCTGCGTGTTTCAGACGAGTGGTACACACGTTTCCGAGTGTCCTGGGATCCTGCAGCCGCACGGGTGAATGGATATAAACTGGTCTATACACCAGTGGGCACAACCGACACCATGGAAGCCTTCGTTGGAGACGTGACTTCACACCACCTGAACAACCTCCAGCCTGGCACCACATACGACCTGAAGGTTTACGCTCAGTATGATGCGGGCTTGAGCGGCGCTCTGGTCGGACAGGGAACCACCCTGTATCTCAACGTGACCGACCTCACTTCCTACAACGTGGGCTACGACTCTTTCTGCATCAGATGGACTCCTCATCGAGCTGCCACCTCCTACAGACTCAAAGTCAACCCTTTCAACCCATCTCACCGTGGAGCTCAGGAGGTCACGATCACTGCGGCTGAGAGCCAGTACTGTTTTGACGGCCTGACGCCAGACGCGCTATACAACGCCACCGTCTACACGCAGACCCCCAACCGAGAGGGGCCCGGAGTCAGTGTCAAAGAGCGCACACTGGTGAAGCCCACCGTCGCCCCAACACTACCTCCAACTCCTCCACCTCCAGCCACCATTCCTTCTGCACTCGAGGTGTGCAAAGGTGCCAAGGCTGACCTGGTGTTCCTGATCGATGGCTCGTGGAGTATCGGAGATGACAGCTTCGCTAAAGTCCGGCAGTTTGTGTTCAGCATGATTGGGGCGTTTGATGTGGTCAGCCATGAGGGCATGCAGGTGTCTTTCGTGCAGTACAGCGACGACGCCAAAACTGAGTTCAAGCTCAACACCTACCACGACAAGGGAATGGTGCTGTCTGCTCTTCAGATGGTCAATTATAGAGGAGGAAACACCAAAACAGGTGCTGCACTGAAGCATGTTGGAGAAAAAGTGTTCACCTCGGACAATGGCATGAGGAGAACCGTTCCCAAGGTACTGGTTGTGGTGACCGATGGACGTTCTCAAGATGACGTGAAGAAGAGCGCTGCTAAACTACAGCATGCAGGTTACAGTGTGTTTGTGGTGGGTGTCGCTGACATTGACGTTAATGAACTGAGGAACATTGGAAGCAAGCCCAGTGACAGACACGTCTTTATCGTCGACAACTTCGATGCTTTCGCCAAGATCCAAGACAACCTGATCACGTTCATCTGTGAAACGGCAACGTCCAcATGCCCTTTGATTTACCTCAATGGATTCACATCACCAGGCTTCAGGATGCTGGAAGCTTTCAACATCACTGACAAGACCTACGCAGGCATGAACGGCGTCTCTCTGGAAACCGGCTCCTTCAACAGCTTCATCGCATACAGACTCCATAAGGACGCCTTCATTTCCCAGCCAACAAAggAAATCCATCCAGATGGTCTTCCTCCATCCTACACCCTCATCCTCCTCTTCCGTCTGCTCCCGGACACCGGCAAGGATGCGTTTGATTTATGGCAGATCTCAGATAAGAACAATAACCCTGAGGTCGGGCTCACCATTGACCcctCCAGCAGAGTGATCTCCTTCTACAATAAAGACACTAGAGGGGAAATTCAGAAAGTCTCCTTTGATAACGACCACGTGAAGAAGATTTTCCACGGCAGTTTCCACAAGctTCACATTTCTATTTCGCCGAAAAATGTCAAACTCAACATCGACTGCCAAGAGGTGGCTGAGAAACAGATCAAAGCAGCCAACAACGTCTCCACAGATGGCTACGAAGTCCTTGGAAAAATGACAAAGTCTGGCGGTTCAAAGAAGCAGTCGGCCACATTCCAGCTCCAGATGTTTGATATTGTCTGCAGTTTGGGCTGGACAAGTCGAGACAAATGTTGTGATATTCCAGCAATGCGAGATGAAGCCAAGTGTCCTGCTCTTCCTCACTCCTGCACATGTGCTCAGGACAGTGTTGGTCCTCCAGGCCCAGCGGGTCCTCAAGGCAGTCCTGGTACAAAAGGCCCACGAGGCGAGAGAGGAGAGTCTGGTCCTACGGGTCCAATGGGTCCACGTGGAGAGCAGGGTCTGCCAGGGCAGATGGGGCCACCGGGTCCACAGGGCCCCAATGGACTATCCCTTCCCGGAGAACCAGGGCGACCGGGACCTAAGGGAGACCCCGGTGACTCAGGTTTACCTGGACAGAGAGGCCCGGTTGGCGCTGCAGGTCCACTCGGCCCTGTTGGACCCGCTGGAGCAAGAGGTCCACCAGGAAGTGAAGGCCCATCTGGACCAAGAGGTCCATCGGGACCAATGGGACCACCGGGAGCTCCCGGAATGCCAGGAATCACCGGAAAACCAGGAAAACCCGGAGACACTGGCTTTCCTGGACCTGTTGGCATGAAAGGAGAGAAGGGTGAAAGAGGAGACACTGCGTCACAGAATATGATGCGCTCTGTAGCGAGACAAGTCTGCGAACAGCTAGTCAGCAGACAAATGAGCAGAATTGATATGATGATGAACCAGATCCCCAGCAACTACAGGAGTAACAGCCCCGGCCCCGCTGGACCTCCAGGCCCACCTGGAAACCAGGGACCCCATGGAGAGCCTGGTCAGCCCGGACCCAATGGCTTCCCAGGAAATCCAGGTTTACCAGGCTCTCCTGGAGAAAGAGGAGTGCCTGGAGAGAAGGGTGAACGAGGCAGCCCCGGCATTGGCACTCGAGGACAGAGAGGATTACCTGGACCTCCTGGGCCACCAGGGCAGTCTCAGACCGGTCCCCCTGGTCCCTCAGGCTCACCCGGGCCCCGAGGACCACCAGGACAACATGGTTCTTCTGGAGTCACAGGACCACCAGGACCTCCAGGATACTGTGACTCCTCTCAGTGCGGCATGCCTTACAACGGACAAGGCTACCCAGGTTTTGCGTAGTATGCTATCTAGACTGCCTGATCCTTTACACATCCCGAGATTAGCACTCACTCTTGAGCTAATAAGGATAACCACCATGGATATGATTGCTGCACATTTGCTGACCAACTCTTTAAAAATCGATCAATCAAACCAAAGGACTGGACTGCCACTAACACCAGCTGAGCGCTTCTATATCATACTGGAGCCAGTGATGGTTGCATCTAGATGAGCGAGAGAGCTGAGGACGCATGTCAAACTACTAACAGCGGTAGATGGTGACATGACTGTACACAAAACTAATCGTGCCTTGTAAATGTTCTGGATGACCCAGTGGGCTACAGTTAACGGCAGTCGTCACGCTTGTGCCTGATAACTTGCTTCTCGCTGACGTTTCACGTTTATTCGTGGTTTCGGTTTATATGTATAGGCAACGCTCAGGTTCAAAACGCAGTGTGTGCCATTAGTATAGTCAACCATGaattcttatatatttttttgatttatatatgtgtataataCCTCACAAAGAtccaatttgtttgtttattttaacgcGAGTGTGTTAGATTAGTAATAGTTTATTGACAAATCCAACGCAAAGTTGTTGACAACTTCCGTATGGGTTTTGTGTTTGGTTAATATAGATGTTCTGTATTACTTTTTCGATAATTAacgctaaaaatgaaaatgatttgtTAAAATGACGCACATGCTCAGCTGGCCAAATAATATTTCCAAGCAGGCCCCTACCAGCCCGGGTCTGAAACCTACGTAGTGCCCATACCAGCCGCGCCATCGGAAGATATCGAGACACAGTCGCCAGGATTGCGCTACCAGCGCGGAAAAAGGTCGCTATCAAGAAAGGAAGCCGAAAGAATCAAAACATAAACGTGGAAGTGTGTCCGTCAAAAACTGCAAGCCTCCTTCGTTTTGGTCGATTGAGGAGGCTGTCGTACCAAACCTGTGTGTTCGCTGATGTTTGCTTGTAACATAACtgcattttttgtatttgtaagaATCTCATGTTCAGTACTAGGTCCTATAAACACTCATGAACTGATTCCTTGCACATATGAAAGTTTGCAAACGTGCTTCTCTCTTTCTCGAGGAAAGCGGCTAAATCGGTTCGACTTCCCTTTATTCTCCCTTTAGACCTGGCTTTTGTTATTCTAAACCCTATATTTACCTGTCGTATACCAgctcacaccaaaaaaaaaagaggaattgCATGCCTGTGTTGTATATTTAGTAAGGACGTTTACCATCAGAATATAGTTGTTCGTTTCAGTGATATCCCTTGAAATGCAGTTGGAATTCGTTGCAAGTCCTTCGACATAGAAGATCTTTTTTTGTTTCCATGTCTGAATTGCACAGTGTGAATTCCACAgccttattttcttatttatttctgAATCAGAAGAGGCATTTTTCAATAAAACTACTGAAAATGTTGAA
>TCONS_00024353
CCGGGAGCTCCCGGAATGCCAGGAATCACCGGAAAACCAGGAAAACCCGGAGACACTGGCTTTCCTGGACCTGTTGGCATGAAAGGAGAGAAGGGTGAAAGAGGAGACACTGCGTCACAGAATATGATGCGCTCTGTAGCGAGACAAGTCTGCGAACAGCTAGTCAGCAGACAAATGAGCAGAATTGATATGATGATGAACCAGATCCCCAGCAACTACAGGAGTAACAGCCCCGGCCCCGCTGGACCTCCAGGCCCACCTGGAAACCAGGGACCCCATGGAGAGCCTGGTCAGCCCGGACCCAATGGCTTCCCAGGAAATCCAGGTTTACCAGGCTCTCCTGGAGAAAGAGGAGTGCCTGGAGAGAAGGGTGAACGAGGCAGCCCCGGCATTGGCACTCGAGGACAGAGAGGATTACCTGGACCTCCTGGGCCACCAGGGCAGTCTCAGACCGGTCCCCCTGGTCCCTCAGGCTCACCCGGGCCCCGAGGACCACCAGGACAACATGGTTCTTCTGGAGTCACAGGACCACCAGGACCTCCAGGATACTGTGACTCCTCTCAGTGCGGCATGCCTTACAACGGACAAGGCTACCCAGGCCCCTACCAGCCCGGGTCTGAAACCTACGTAGTGCCCATACCAGCCGCGCCATCGGAAGATATCGAGACACAGTCGCCAGGATTGCGCTACCAGCGCGGAAAAAGGTCGCTATCAAGAAAGGAAGCCGAAAGAATCAAAACATAAACGTGGAAGTGTGTCCGTCAAAAACTGCAAGCCTCCTTCGTTTTGGTCGATTGAGGAGGCTGTCGTACCAAACCTGTGTGTTCGCTGATGTTTGCTTGTAACATAACtgcattttttgtatttgtaagaATCTCATGTTCAGTACTAGGTCCTATAAACACTCATGAACTGATTCCTTGCACATATGAAAGTTTGC
>TCONS_00024354
atgaagatcaggTTGTCTTTGGCCGCTGCTGCGCTCTTGACTCTAGTACTCAGTTCAGTAGAGGCTCAAGTGGAGCCTCCGTCAGACTTAAAATTTAAAATCCTGAATGAAAACACAGTGCAAATGTCATGGAGGAAGCCCTCGTCTCAGATACAGGGCTACAGAATACAGGTCACGTCAGATACAGATGATTCTAAAGAATTGAGTCTTCCTGCCTCGTCCACAAGCACATCAATTACAGATCTAACTCCAGATGTAGACTATTCAGTGTCAATCAATTCATATGATGGTGCTGAAGAAAGTATCCCTATCCTTGGACAAATCACAATTCAATCCAGCAACACAAGTGGACCAAGGAGGCCACAGTCAGAGGCTGTCAAGTGTTCAGTGAGTGCCGTTGCGGATCTGGTTTTCCTGGTGGACGGCTCTTGGAGTGTGGGAAGAGAAAACTTTAGATTTATCCGGAGTTTCATTGGGGCCATGGCCGGGGCCTTCGACATTGAAGAGGATAAGACCAGAGTGGCTGTGGTTCAGTACAGCTCGGACACCAGGACAGAGTTCAGTCTAAACACACATTTCAGACGACCCGATGTCCTGCGAGCCATTAAAAATCTGCCGTACAAGGGTGGAAATACCATGACGGGTGATGCAATGGACTATCTGGTGAAAAACACGTTCACTCAGGCGGCTGGAGCCAGGAAAGGCTTCCCAAAAGTGGCCATGATCATCACAGATGGAAAATCTCAAGACCCCGTAGAGGAGTACGCCGAACGGTTGAGGAACATCGGAGTGGAGATCTTTGTGCTGGGTATCAAAGGAGCAGATGAGGACGAGCTGAAGGAGATCGCCTCCAGACCCCATAGCAAGCATGTCTATAACGTCCCCAACTTCGACATGATCAATCAGGTCCAGAAGGCGCTCATCACTGAAGTTTGCTCTGGCGTGGAGGAGCAGCTAAATTCCCTTGTAAGCGGGGAGGAAGTTGTCGAACCAGCTTCCAACCTCAGAGTGACAGATATCTCCTCCAAATCCATGAGAATTGCGTGGGATTCATCTCCTGGTGATATCACAGGCTATAAGCTGCAGGTTTTTCCCACTATTGCGAGCGCCAAAAAGCAGGAGCTCTACACTGGGCCCACGATGACCTTGGCCAATGTCAGAGACCTGACGCCTGAGATGGAGTATGAGATCAGTCTGTTTGCTCTCAAAGGTCTGACTCCTAGTGTGCCGCAAGTTGTCACTGAGAAAACTCAGCCAGTGAAAGTATTTACAGAGTGTTCCCTAGAGGTGGATGTCCAAGCTGACATTGTCCTCCTGGTGGATGGGTCATATAGTATAGGACTGCCTAACTTTGCGAAGGTTAGAGCTTTCCTCGAAGTACTTGTGAATTCTTTTGACATCGGACCTAACAAAGTGCAGATCAGCTTGGTTCAGTACAGCAGGGATCCTCACACTGAGTTCGCCTTGAATAAATTCGATGACAATGCAGCCATGGTCAAGGCGGTCCGCACCTTCCCCTACCGAGGTGGATCCACCAACACCGGCAAGGCCATGACATATGTGAGGGAAAAGATCTTTGTTTCGGGCCGTGGCGCTCGTGATAACGTCCCCCGAGTCATGGTGCTTATCACAGACGGCAAGTCCTCAGATTCTTTCAAAGACCCCGCCAACAAACTGAGGGATACAGATGTGGAGATTTTTGCAGTGGGAGTAAAAGATGCCGTACGATCTGAGCTGGAGGCTATCGCCAATGTTCCTGCTGATAACCATGTGTTTGAGGTGGAGGACTTTGATGCTTTCGAGCGGATCTCCAAGGAGCTGACCGCGTCCATCTGCCTCAGAATTGAGCAGGAGCTCCATAACATCAGGAAAAGAAGTTTGCTTCCCCCAAAGTCACTGAGCTTCTCTGAGGTGACCTCCAGGAGTTTCAGGACCTCATGGGTTTCTGATGGAGAGGATATCCTGTCTTTTCTGGTGCGCTTCAGGCCAGCGGCGGACCTAACTGGAGACTACATCTCTCTGGTGGTTCCCCATGACATCACCAGTACAATTCTGCCCAATCTCACGCCACTCACCACCTACGAAGTTAACGTCATTGCTCAGTATGATAAAGGAGACAGCTTTCCTTTGACGGGCGAGGAGACCACTTTAGAAGAGTTGGGTTCTGTTCGTAACCTGATGGTGAGCGAGGAGGCTGTGGACCGCTTTCGGGTGTCGTGGAGAGCTGCTCCAGGATTAGTGCTGAGGTACAGACTGCTCTACGAGCCTGTGAGCGGAGGGGATAAACTGGAAGCAGAGACTGATGGGAATCAGGTCACCACTGTGCTCAATGAACTACTACCGGTCACTACTTACCGGGTCACCGTTTACCCTGAGTACGCAAGTGGAAGGGGTCCCTCCATGGACACTGAAGGCACCACCAAAGAAGTTCGAGGTTCTCCACGCGACTTAAGGGTCTTCAATGAGACGGTGTCTAGCATGAGGGTCTCGTGGCGGGCTGCCCCAGGCAACGTGCTTCAATATCAGGTGGCCTACAAACCTGACGGTGGGGAGAGGAAAGAAATAAGTGTTAAAGGAGAGACAACAACTGCTGTGCTGAAAAATCTGCTGCCGGACACGGAGTATGAGCTGTTTGTTAGCGCACGTTACGTCTCTGGACTTGGCGCACCACTTATGGGAACAGGCACCACGCTGGAAGAACTTGGTTCACCTTCGAATCTGGTAACTTCAGACGTCACTGAGAACAGTTTTGTAGCATCCTGGACCGCCGCCCCTGGAAACGTCCGTCTTTATCGGGTCACCTGGAAATCCCTCTTTTCAGAGGAAGCTGGCGAGAAGACTGTCCCCGGGGACGTAACCACCACTGTTCTGGACGGGCTGACACCAGAGACCCGCTACAAGGTTTCTGTCTACGCTGTCTACAGCCGTGCGGAGGGGGCGCCACTGCACGGAGAGGAGACCACAGATGTGTCGGCCGCTACCAGAGCTCTTACGGTGTCAGAAGAAACAGAGAGGACCATGAAGGTGACATGGATACCAGCACCTGGCAATGTTGTCAATTACAGGGTATCATACAAACCTCAGGGTGATTTACGCCAAATGGCCTCCAAAGCACCAGGAGGCACCAATTCTATAGTCCTGAGACGCCTGATCCCCCAGACCACTTACGATATCACAGTGGTTCCCGTCTACAAGTTTGGGGATGGAAGACAAAGGCAAGGAGAAGGAACTACATTGTCTCAATATAAAGCTCCCAGAAACTTGCAAACTTCGGAGCCCACTAAAACCAGTTTCAGGGTGACCTGGGATCATGCTCCTGGAGATGTAAAAGGCTACAAGGTCACTTTCCATCCCACCGGAAAGGAAGTGGACCTGGGAGAGTTACTCGTAGGCCCCTATGACAACACTGTGGTTCTGGAGGAACTAAGGGCCGGCACTAAGTATACGGTAAATGTGTTTGGTATGTTTGATGGAGGAGAGAGTATGCCATTGGCTGGAGAGGAGAAGACCACCCTCTCTGACGCAGCTTCTGAAAACCTCCCTTATACACCTTCAGATGCCCAGTGTAAAACCACGGCCCAAGCGGATATCGTCCTGCTTGTTGATGGATCTTGGAGCATTGGTCGCCTGAACTTCAAGACCATACGCAATTTCATTGCTCGCATGGTGGGAGTCTTCGACATCGGCCCCGATCGTGTCCAGATTGGTCTGGCACAGTACAGCGGAGACCCGAAGACTGAGTGGCATCTCAATGCTCACAGAACCAGGACTCAGCTGCTGGATGCGGTGGCCAATCTACCCTACAAAGGAGGAAACACTCTCACCGGCCTTGCTTTGAATTACATCCTTCAGAATAACTTCAAGCCTAACGTTGGCATGCGTCCAAACTCCAGAAAGATCGGCGTCCTGGTCACTGATGGCAAGTCCCAAGACGACATTGTGGCGAACTCACAGAACCTGCGGGACCAAGGGATTGAACTGTACGCCATTGGTGTAAAGAACGCAGATGAGAATGAGTTGAGAACCATTGCTTCCGATCCCGATGACATTCACATGTACAACGTGGCTGATTTCTCCTTCCTGCTGGACATTGTGGATGACCTCACAAACAACCTGTGCAACAGCGTCAAAGGTCCAGGAGGAGGACCAGAGCCACCCACTGATCTGACCACCTCAGAGGTCACACATTACTCTTTCCGTGCCACTTGGGTGGCTCCTGACGGGCCTGTGGAGAAGTACAGAGTGGAGTATGTGAGCACCGCTGGAGGAGAACCACAGCAACAGATGTTTGTGGACGGGACGGTGACCACTGTGGTTTTGGAAGGTCTCACTCCGCTGACCGAGTACATAGTAAAGGTTTACTCAGTGGTGGGAGAGGACAGCAGCGACCCACTCAGAGGCATAGAGACCACATTGCCTCTTCCTCCATCCGGTGAGTTGAGGATTACCGATGTGACCCACAGCACCATGCAGCTGGACTGGGACGCTGCGCCCGGCGCCGTCCGAAAGTACATCATCACTTACAAGCCAGAGGAGGGAGAGGCGAAGGAGCTTGAAGTTGACGGAGATGTAACATCTAGAGGCCTGGATAATCTCATCTCCCAGACTGAATATGATGTGGCTGTGACTCCGGTTTATGATTCGGGCACTGGAAACCCCATGCTTAACCAGGCCATTACAGATGTGGTTCCTGCCCCGCAGAACTTGAGGTTCTCGATGGTGACCCAGACCAGTTTTAGGGTTCACTGGGAGCACGGCGCTCCTGATGTCTCCCTCTACCGTATTGGCTGGAAAAAGAAAGGAACGACCGAGTTTCAAAATGATATCCTGAGTAGTGAAGACACTACATATGATCTGGTGGACCTGGAGCCAGACACACCTTATGATGTTTCGGTCACTGCCATTTACCCTGATGAGTCTGAGAGCGAGGATCTGCTGGGCACTGAACGCACTTTGGCCAAGCTTGCTACACCACCTCCCAGTGGTCCTCCTCAAAACCTCCAGGTGTTCGACGAGACCACCACCTCCCTCACGACTAAGTGGGACCACGCGCCTGGACGAGTTCAGAACTACAAAATCACCTACGTACCGCTTACTGGAGGACGATCACAGTcgACGCAGGTCGGAGGAAAGAAAAACACAGTGATCCTGCAGAAACTGACTCCAGACACTCCTTACTCCATCACTGTTGCTGCGGTCTACGCCAGCGGAGAGGCCAGAGACATTTCTGGCCAAGGAAAGACATTGCCGCTGGGCAGTGTCAGGAATCTTCAGGTCACTGACCCCACAGTTAGCACTCTGAATGTGCGCTGGGAGCCGGCGGAGGGAAGCGTTCGCCAGTACAGGATCTACTACCAGCCCGTCGCAGGGGGCGCAGAGGACATGGTCCAGGTTCCTGGAAGCACCACCAGCACCGTTCTGAAGAACCTGCAATCTGACACTCAGTACAGAGTGACGGTGGTGCCAGTCTACGCTCCTGGAGAGGGCAAGCGCATGTCGGAGACCGGAAAAACACTGGTTCGGACCCCTGCCAAGAACATCCAGGTTTACAACCCCACCACAAACACCCTGAACGTGCGCTGGGAGCCGGCCTCAGGACAGGTGCAGCAGTACCGCGTGGCTTACGCCCCTCTCTCCGGGATCCGACCCTCTCAGTCGGTGCTGGTTCCAGGAAACACCCACACGGCTCTGCTGCAGCAGCTGGAATCAGACACTGACTACTCTGTGAGTGTGGTGGCTCTGTATGCTGATGGAGAGGGCTCGTCTGTGTCTGATAATGGCAAAACACTGCCCCGCAGTGGCCCCAGGAACCTGCGGGTTTATGATCCCACCACCAGCACGCTGTCGGTGGGCTGGGAACATGCAGAAGGGCCTGTGATTCAGTACCGCATTGGCTACGCACCCACCACTGGAGATCCCATTGAAGAATTTACAACTGTCCCAGGCAACCGTAACTCGGTCATCCTGCAAAACCTGCAGCCAGACACGCCGTACAACATCAACGTAGAAGCCATTTATCAAGATGGCCCTGGAGGACGACTCAGTGGAGATGGAAAAACATTGGATCTCCTTGGGCCTCGTAACCTGCGTGTTTCAGACGAGTGGTACACACGTTTCCGAGTGTCCTGGGATCCTGCAGCCGCACGGGTGAATGGATATAAACTGGTCTATACACCAGTGGGCACAACCGACACCATGGAAGCCTTCGTTGGAGACGTGACTTCACACCACCTGAACAACCTCCAGCCTGGCACCACATACGACCTGAAGGTTTACGCTCAGTATGATGCGGGCTTGAGCGGCGCTCTGGTCGGACAGGGAACCACCCTGTATCTCAACGTGACCGACCTCACTTCCTACAACGTGGGCTACGACTCTTTCTGCATCAGATGGACTCCTCATCGAGCTGCCACCTCCTACAGACTCAAAGTCAACCCTTTCAACCCATCTCACCGTGGAGCTCAGGAGGTCACGATCACTGCGGCTGAGAGCCAGTACTGTTTTGACGGCCTGACGCCAGACGCGCTATACAACGCCACCGTCTACACGCAGACCCCCAACCGAGAGGGGCCCGGAGTCAGTGTCAAAGAGCGCACACTGGTGAAGCCCACCGTCGCCCCAACACTACCTCCAACTCCTCCACCTCCAGCCACCATTCCTTCTGCACTCGAGGTGTGCAAAGGTGCCAAGGCTGACCTGGTGTTCCTGATCGATGGCTCGTGGAGTATCGGAGATGACAGCTTCGCTAAAGTCCGGCAGTTTGTGTTCAGCATGATTGGGGCGTTTGATGTGGTCAGCCATGAGGGCATGCAGGTGTCTTTCGTGCAGTACAGCGACGACGCCAAAACTGAGTTCAAGCTCAACACCTACCACGACAAGGGAATGGTGCTGTCTGCTCTTCAGATGGTCAATTATAGAGGAGGAAACACCAAAACAGGTGCTGCACTGAAGCATGTTGGAGAAAAAGTGTTCACCTCGGACAATGGCATGAGGAGAACCGTTCCCAAGGTACTGGTTGTGGTGACCGATGGACGTTCTCAAGATGACGTGAAGAAGAGCGCTGCTAAACTACAGCATGCAGGTTACAGTGTGTTTGTGGTGGGTGTCGCTGACATTGACGTTAATGAACTGAGGAACATTGGAAGCAAGCCCAGTGACAGACACGTCTTTATCGTCGACAACTTCGATGCTTTCGCCAAGATCCAAGACAACCTGATCACGTTCATCTGTGAAACGGCAACGTCCAcATGCCCTTTGATTTACCTCAATGGATTCACATCACCAGGCTTCAGGATGCTGGAAGCTTTCAACATCACTGACAAGACCTACGCAGGCATGAACGGCGTCTCTCTGGAAACCGGCTCCTTCAACAGCTTCATCGCATACAGACTCCATAAGGACGCCTTCATTTCCCAGCCAACAAAggAAATCCATCCAGATGGTCTTCCTCCATCCTACACCCTCATCCTCCTCTTCCGTCTGCTCCCGGACACCGGCAAGGATGCGTTTGATTTATGGCAGATCTCAGATAAGAACAATAACCCTGAGGTCGGGCTCACCATTGACCcctCCAGCAGAGTGATCTCCTTCTACAATAAAGACACTAGAGGGGAAATTCAGAAAGTCTCCTTTGATAACGACCACGTGAAGAAGATTTTCCACGGCAGTTTCCACAAGctTCACATTTCTATTTCGCCGAAAAATGTCAAACTCAACATCGACTGCCAAGAGGTGGCTGAGAAACAGATCAAAGCAGCCAACAACGTCTCCACAGATGGCTACGAAGTCCTTGGAAAAATGACAAAGTCTGGCGGTTCAAAGAAGCAGTCGGCCACATTCCAGCTCCAGATGTTTGATATTGTCTGCAGTTTGGGCTGGACAAGTCGAGACAAATGTTGTGATATTCCAGCAATGCGAGATGAAGCCAAGTGTCCTGCTCTTCCTCACTCCTGCACATGTGCTCAGGACAGTGTTGGTCCTCCAGGCCCAGCGGGTCCTCAAGGCAGTCCTGGTACAAAAGGCCCACGAGGCGAGAGAGGAGAGTCTGGTCCTACGGGTCCAATGGGTCCACGTGGAGAGCAGGGTCTGCCAGGGCAGATGGGGCCACCGGGTCCACAGGGCCCCAATGGACTATCCCTTCCCGGAGAACCAGGGCGACCGGGACCTAAGGGAGACCCCGGTGACTCAGGTTTACCTGGACAGAGAGGCCCGGTTGGCGCTGCAGGTCCACTCGGCCCTGTTGGACCCGCTGGAGCAAGAGGTCCACCAGGAAGTGAAGGCCCATCTGGACCAAGAGGTCCATCGGGACCAATGGGACCACCGGGAGCTCCCGGAATGCCAGGAATCACCGGAAAACCAGGAAAACCCGGAGACACTGGCTTTCCTGGACCTGTTGGCATGAAAGGAGAGAAGGGTGAAAGAGGAGACACTGCGTCACAGAATATGATGCGCTCTGTAGCGAGACAAGTCTGCGAACAGCTAGTCAGCAGACAAATGAGCAGAATTGATATGATGATGAACCAGATCCCCAGCAACTACAGGAGTAACAGCCCCGGCCCCGCTGGACCTCCAGGCCCACCTGGAAACCAGGGACCCCATGGAGAGCCTGGTCAGCCCGGACCCAATGGCTTCCCAGGAAATCCAGGTTTACCAGGCTCTCCTGGAGAAAGAGGAGTGCCTGGAGAGAAGGGTGAACGAGGCAGCCCCGGCATTGGCACTCGAGGACAGAGAGGATTACCTGGACCTCCTGGGCCACCAGGGCAGTCTCAGACCGGTCCCCCTGGTCCCTCAGGCTCACCCGGGCCCCGAGGACCACCAGGACAACATGGTTCTTCTGGAGTCACAGGACCACCAGGACCTCCAGGATACTGTGACTCCTCTCAGTGCGGCATGCCTTACAACGGACAAGGCTACCCAGGTTTTGCGTAG
>TCONS_00024355
ACGGGAGGCTTGCGGGTATGGAGTGAATCGAATCGGATTTTCCTGAGCGGCTGATCTTGGAGGAGGACTTGCAGAGGGAAGGGAGTCCGATGTTGCGTTTTTGTAAAGTTTAAGGAGTTCCGGTTTTTTGAGATTTTTGGGAGCGTTGATTCCGAGGATGGCGAGCTTGTTCCTGATTTCTGATACGGTGATTCTACTTGGATGGATGACTGAGGAGGTTGCGGAGATATAAGATGAGGTGCTGGTTCCAGGAAACACCCACACGGCTCTGCTGCAGCAGCTGGAATCAGACACTGACTACTCTGTGAGTGTGGTGGCTCTGTATGCTGATGGAGAGGGCTCGTCTGTGTCTGATAATGGCAAAACACTGCCCCGCAGTGGCCCCAGGAACCTGCGGGTTTATGATCCCACCACCAGCACGCTGTCGGTGGGCTGGGAACATGCAGAAGGGCCTGTGATTCAGTACCGCATTGGCTACGCACCCACCACTGGAGATCCCATTGAAGAATTTACAACTGTCCCAGGCAACCGTAACTCGGTCATCCTGCAAAACCTGCAGCCAGACACGCCGTACAACATCAACGTAGAAGCCATTTATCAAGATGGCCCTGGAGGACGACTCAGTGGAGA

Function

symbol description
col12a1a Acts upstream of or within regeneration and regulation of axon regeneration. Predicted to be located in extracellular region. Predicted to be part of collagen trimer. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including immature eye; integument; myoseptum; nervous system; and trunk vasculature. Human ortholog(s) of this gene implicated in Ullrich congenital muscular dystrophy. Orthologous to human COL12A1 (collagen type XII alpha 1 chain).

GO:

id name namespace
GO:0031099 regeneration biological_process
GO:0048679 regulation of axon regeneration biological_process
GO:0035987 endodermal cell differentiation biological_process
GO:0062023 collagen-containing extracellular matrix cellular_component
GO:0005581 collagen trimer cellular_component
GO:0005615 extracellular space cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-090728-1 Acts upstream of or within regeneration and regulation of axon regeneration. Predicted to be located in extracellular region. Predicted to be part of collagen trimer. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including immature eye; integument; myoseptum; nervous system; and trunk vasculature. Human ortholog(s) of this gene implicated in Ullrich congenital muscular dystrophy. Orthologous to human COL12A1 (collagen type XII alpha 1 chain).

Ensembl:

ensembl_id ENSDARG00000078322

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024352 False 10560 mRNA 0.51 64 49785495 49978986
TCONS_00024353 False 940 mRNA 0.54 7 49785866 49800869
TCONS_00024354 False 8928 mRNA 0.53 63 49786932 49977966
TCONS_00024355 True 630 processed_transcript 0.53 4 49854407 49860935

Neighbor

gene id symbol gene type direction distance location
XLOC_012411 zgc:171599 coding downstream 148472 49631844 ~ 49637023 (-)
XLOC_012410 CU929037.3 coding downstream 190758 49587635 ~ 49594737 (-)
XLOC_012409 CU929037.1 coding downstream 204081 49566461 ~ 49581414 (-)
XLOC_012408 zmp:0000001267 coding downstream 242447 49529197 ~ 49543048 (-)
XLOC_012406 fcf1 coding downstream 303823 49457158 ~ 49481672 (-)
XLOC_012413 cox7a2a coding upstream 4171 49983157 ~ 49995366 (-)
XLOC_012414 tmem30aa coding upstream 19173 49998159 ~ 50010121 (-)
XLOC_012415 filip1a coding upstream 34608 50013594 ~ 50022827 (-)
XLOC_012416 FO834825.1 coding upstream 58658 50037644 ~ 50040927 (-)
XLOC_012417 FO834825.2 coding upstream 65403 50044389 ~ 50045375 (-)
XLOC_012407 NA non-coding downstream 314826 49464309 ~ 49470669 (-)
XLOC_012405 CABZ01003476.2 non-coding downstream 334197 49451177 ~ 49451298 (-)
XLOC_012401 gpx2 non-coding downstream 436303 49345771 ~ 49349192 (-)
XLOC_012399 CU695076.1 non-coding downstream 558176 49227204 ~ 49227319 (-)
XLOC_012419 NA non-coding upstream 73185 50052171 ~ 50063437 (-)
XLOC_012432 NA non-coding upstream 996797 50975783 ~ 50984690 (-)
XLOC_012433 NA non-coding upstream 1020866 50999852 ~ 51004995 (-)
XLOC_012434 NA non-coding upstream 1036125 51015111 ~ 51018821 (-)
XLOC_012440 NA non-coding upstream 1597080 51576066 ~ 51618363 (-)

Expression


Co-expression Network