XLOC_012407


Basic Information

Item Value
gene id XLOC_012407
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 49464309 ~ 49470669 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024556
ACACAGGGAGTGAATTAGAAGGATGGAGCTTTATTTCATCAGCTGGATGTGCCAGTCTTCAGGGGTGTAATTTGAGAGCAGCAGGTGATTGGACGTCCCGTCAGATATTCAGATAGCGGATGTCATCTTTTCTCCTGCAGGGGACTGCGTTGTCAGCTCTTCCTTGGACATCCTATCTGCAATCTTTTCTGAAAGACATTTCAAGACCGAGGGCTGAAAGATCAGGTATCAGCGAGGGGATAAGAGATGATTTACACTTGACTGGGGCAATACGTTTATTGAGGTGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024556 True 288 lncRNA 0.47 2 49464309 49470669

Neighbor

gene id symbol gene type direction distance location
XLOC_012405 CABZ01003476.2 coding downstream 13011 49451177 ~ 49451298 (-)
XLOC_012404 cga coding downstream 20910 49439219 ~ 49443399 (-)
XLOC_012403 znf292a coding downstream 25436 49415354 ~ 49438873 (-)
XLOC_012402 mthfd1b coding downstream 51996 49354343 ~ 49412313 (-)
XLOC_012401 gpx2 coding downstream 115117 49345771 ~ 49349192 (-)
XLOC_012408 zmp:0000001267 coding upstream 58528 49529197 ~ 49543048 (-)
XLOC_012409 CU929037.1 coding upstream 95792 49566461 ~ 49581414 (-)
XLOC_012410 CU929037.3 coding upstream 116966 49587635 ~ 49594737 (-)
XLOC_012411 zgc:171599 coding upstream 161175 49631844 ~ 49637023 (-)
XLOC_012412 col12a1a coding upstream 314826 49785495 ~ 49978986 (-)
XLOC_012399 CU695076.1 non-coding downstream 236990 49227204 ~ 49227319 (-)
XLOC_012395 NA non-coding downstream 545395 48916486 ~ 48918914 (-)
XLOC_012390 NA non-coding downstream 856162 48607713 ~ 48608147 (-)
XLOC_012419 NA non-coding upstream 581502 50052171 ~ 50063437 (-)
XLOC_012432 NA non-coding upstream 1505114 50975783 ~ 50984690 (-)
XLOC_012433 NA non-coding upstream 1529183 50999852 ~ 51004995 (-)
XLOC_012434 NA non-coding upstream 1544442 51015111 ~ 51018821 (-)

Expression


Co-expression Network