RNA id: XR_005053418.1


Basic Information

Item Value
RNA id XR_005053418.1
length 394
RNA type mRNA
GC content 0.49
exon number 3
gene id LOC118966140
representative True

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 95100995 ~ 95101738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TGAGGATGGTTATACTGTGTCCAGGTGAGGATGGTTATACTGTGTCCAGGTGAGGATGGTTATACTGTGTCCAGGTGAGGATGGTTATACTGTGTCCAGGTGAGGATGGTTACACTGTGTCCAGGTGAGGATGGTTATACTGTGTCCAGGTGAGGATGGTTATACTGTGTCCAGGTGAGGATGGTTATACTGTGTCCAGGTGAGGATGGTTACACTGTGTCCAGGTGAGGATGGTTATACTGTGTCCAGGTGAGGATGGTTATACTGTGTCCAGGTGAGGATGGTTATACTGTGTCCAGGTGAGGAAGGCCACTCTGTGTCCAGGTGAGGATGGTTATACTGTGTCCAGGTGAGGATGGTTATACTGTGTCCAGGTGAGGATGGCTATACTGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU115570 lncRNA upstream 18333 95082338 ~ 95082662 (+) True G103174
TU115555 lncRNA upstream 61209 95038238 ~ 95039786 (+) True G103163
TU115559 lncRNA upstream 62834 95037460 ~ 95038161 (+) True G103164
TU115547 lncRNA upstream 90687 95009643 ~ 95010308 (+) True G103156
TU115540 lncRNA upstream 118117 94982435 ~ 94982878 (+) True G103151
TU115578 lncRNA downstream 5854 95107592 ~ 95107823 (+) True G103181
TU115584 lncRNA downstream 19443 95121181 ~ 95121382 (+) True G103187
TU115585 lncRNA downstream 23832 95125570 ~ 95126041 (+) True G103188
TU115586 lncRNA downstream 24929 95126667 ~ 95126887 (+) True G103189
TU115590 lncRNA downstream 45022 95146760 ~ 95149227 (+) True G103193
XM_036989163.1 mRNA upstream 385323 94642693 ~ 94715672 (+) False LOC110499554
XM_036989216.1 mRNA downstream 373041 95474779 ~ 95478784 (+) True LOC118966142
XM_036990109.1 mRNA downstream 383940 95485678 ~ 95619013 (+) True LOC110516878
TU115442 other upstream 334438 94766174 ~ 94766557 (+) True G103091
TU115224 other upstream 544806 94555064 ~ 94556189 (+) False G102936
TU115225 other upstream 544806 94555064 ~ 94556189 (+) False G102936
TU115226 other upstream 544806 94555064 ~ 94556189 (+) False G102936
TU115227 other upstream 544806 94555064 ~ 94556189 (+) True G102936
TU116143 other downstream 377051 95478789 ~ 95480329 (+) True G103584
TU116174 other downstream 462601 95564339 ~ 95565530 (+) True G103605
TU116208 other downstream 590249 95691987 ~ 95694076 (+) True G103633

Expression Profile