RNA id: TU116208


Basic Information

Item Value
RNA id TU116208
length 1370
RNA type TUCP
GC content 0.44
exon number 3
gene id G103633
representative True

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 95691987 ~ 95694076 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cagtgtggtaacgatgcaacagactgctgtgagtcagtgtgataacaatggaccagactgctgtgagtcagtgtggtaacgatgcaccagactgctgtgagtcagtgtggtaacgatgcaccagactgctgtgagtcagtgtgttaacgatgcaccagactgctgtgagtcagtgtggtaacgatgcaccagactgctgtgagtcagtgtggtaacgatgcaccagactgctgtgagtcagtgtggtaacgatgcaccagactgctgtgagtcagtgtggtaacgatggaccagactgctgtgagtcagtgtgataACAATGGACCAGACTGCcgtgagtcagtgtggtaacgatggaccagactgctgtgagtcagtgtggtaacgatggaccagactgctgtgagtcagtgtggtaacgatggaccagactgctgtgagtcagtgtggtaacgatggaccagactgctgtgagtcagtgcggtaacgatggaccagactgctgtgagtcagtgtgataacaatggaccagactgctgtgagtcagtgtggtaacgatggaccagactgctgtgagtcagtgtggtaagGATACAGACCTAGTAGAGTCATCTGTAAACACGAATCACTTCGCTTTTTCAGCCCCTACACCACTTACCCTGTTTACCAGTGTTTCAGCCCCTACACCACTTACCCTGTTTACCAGTGTTTCAGCCCCTACACCACTTACCCTGTTTACCAGTGTTTCAGCCTCTACACCACTTACCCTGTTTACCAGAGTGTTTCAGCCCCTACACCACTTACCCTGTTTACCAGTGTTTCAGCCCCTACACCACTTACCCTGTTTACCAGAGTGTTTCAGCCCCTACACCACTTACCGTGTTTACCAGTGTTTCAGCCCCTACACCACTTACAGTGTTAACCAGTGTTTCAGCCCCTACACCACTTACCCTGTTTACCAGAGTGTTTCAGCCCCTACACCACTTACCCTGTTTACCAGTGTTTCAGCCCCTACACCACTTACCCTGTTTACCAGAGTGTttcagcccccacaccacttaCCCTGTTTACCAGTGTTTCAGCCTCTACACCACTTACCCTGTTTCCCAGAGTGTTTCAGCCCCTACACCACTTACCATGTTTACCAGAGTGTTTCAGCCCCTACACCACTTACCCTGTTTATCAGTGTTTCAGCCCCTACACCACTTACCCTGTTTACCAGAGTGTTTCAGCCCCTACACCACTTACCCTGTTTACCAGTGTTTCAGCCCCTACACCACTTACCCTGTTTACTAGTGTTTCATTCCCTACACCACTTACTGTGTTTACCAGTGTTTCAGCCCCTACACCACTTACCATGTTTACCAGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU116207 lncRNA upstream 1301 95690463 ~ 95690686 (+) True G103632
TU116204 lncRNA upstream 1546 95689390 ~ 95690441 (+) True G103630
TU116198 lncRNA upstream 11382 95678378 ~ 95680605 (+) True G103626
TU116171 lncRNA upstream 157638 95533961 ~ 95534349 (+) True G103603
TU116168 lncRNA upstream 165290 95526204 ~ 95526697 (+) False G103602
TU116377 lncRNA downstream 26188 95720264 ~ 95720696 (+) True G103758
XM_036990109.1 mRNA upstream 72974 95485678 ~ 95619013 (+) True LOC110516878
XM_036989216.1 mRNA upstream 213203 95474779 ~ 95478784 (+) True LOC118966142
XM_036989200.1 mRNA upstream 441916 94717155 ~ 95250071 (+) True LOC110511675
XR_005053418.1 mRNA upstream 590249 95100995 ~ 95101738 (+) True LOC118966140
XM_036989191.1 mRNA upstream 976315 94646559 ~ 94715672 (+) False LOC110499554
TU116174 other upstream 126457 95564339 ~ 95565530 (+) True G103605
TU116143 other upstream 211658 95478789 ~ 95480329 (+) True G103584
TU115442 other upstream 925430 94766174 ~ 94766557 (+) True G103091
TU115225 other upstream 1135798 94555064 ~ 94556189 (+) False G102936

Expression Profile