RNA id: TU116171


Basic Information

Item Value
RNA id TU116171
length 266
lncRNA type intronic
GC content 0.37
exon number 2
gene id G103603
representative True

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 95533961 ~ 95534349 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTTCTTTCCCATTTCCTCCCACGTCCTCCCATCCAGGTGAGGTTCTTTCCCATTTCCTCCCACGTCGTCCCATCCAGGTGAGGTTCTTTCCCATTTCCTCCCACGTCGTCCCATCCAGGTGAGGTTCTTTCCCATTTCCTCCCACGTCGTCCCATCCAGGTGAGGTTCTTTCCCATTTCCTCCCACGTCGTCCCATCCAGGTGAGGTTCTTTCCCATTTCCTCCCACGTCCTCCCATCCAGGTGAAGCTCATTTCCATTTCCTCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU116168 lncRNA upstream 7264 95526204 ~ 95526697 (+) False G103602
TU116169 lncRNA upstream 7264 95526204 ~ 95526697 (+) True G103602
TU116162 lncRNA upstream 21761 95511885 ~ 95512200 (+) True G103596
TU116147 lncRNA upstream 50408 95481768 ~ 95483553 (+) False G103587
TU116146 lncRNA upstream 50408 95482234 ~ 95483553 (+) True G103587
TU116198 lncRNA downstream 144029 95678378 ~ 95680605 (+) True G103626
TU116204 lncRNA downstream 155041 95689390 ~ 95690441 (+) True G103630
TU116207 lncRNA downstream 156114 95690463 ~ 95690686 (+) True G103632
TU116377 lncRNA downstream 185915 95720264 ~ 95720696 (+) True G103758
XM_036989216.1 mRNA upstream 55177 95474779 ~ 95478784 (+) True LOC118966142
XM_036989200.1 mRNA upstream 283890 94717155 ~ 95250071 (+) True LOC110511675
XR_005053418.1 mRNA upstream 432223 95100995 ~ 95101738 (+) True LOC118966140
XM_036989191.1 mRNA upstream 818289 94646559 ~ 94715672 (+) False LOC110499554
TU116143 other upstream 53632 95478789 ~ 95480329 (+) True G103584
TU115442 other upstream 767404 94766174 ~ 94766557 (+) True G103091
TU115225 other upstream 977772 94555064 ~ 94556189 (+) False G102936
TU116174 other downstream 29990 95564339 ~ 95565530 (+) True G103605
TU116208 other downstream 157638 95691987 ~ 95694076 (+) True G103633

Expression Profile