Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU306350 |
| length | 366 |
| lncRNA type | sense_over |
| GC content | 0.48 |
| exon number | 2 |
| gene id | pde11a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 50378400 ~ 50436074 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU306371 | lncRNA | downstream | 1753 | 50410694 ~ 50410898 (-) | True | G269680 |
| TU306369 | lncRNA | downstream | 2846 | 50409472 ~ 50409805 (-) | True | G269678 |
| TU306359 | lncRNA | downstream | 19042 | 50393291 ~ 50393609 (-) | True | G269668 |
| TU306358 | lncRNA | downstream | 19631 | 50392250 ~ 50393020 (-) | True | G269667 |
| TU306356 | lncRNA | downstream | 22652 | 50389762 ~ 50389999 (-) | True | G269665 |
| TU306378 | lncRNA | upstream | 5367 | 50418537 ~ 50418884 (-) | True | G269687 |
| TU306456 | lncRNA | upstream | 117784 | 50530954 ~ 50531200 (-) | True | G269761 |
| TU306458 | lncRNA | upstream | 118101 | 50531271 ~ 50531890 (-) | True | G269762 |
| TU306478 | lncRNA | upstream | 187808 | 50600978 ~ 50605536 (-) | True | G269779 |
| TU306518 | lncRNA | upstream | 289076 | 50702246 ~ 50702996 (-) | True | G269817 |
| XM_021597223.2 | mRNA | downstream | 79745 | 50325109 ~ 50332906 (-) | True | nfe2l2a |
| XM_036974459.1 | mRNA | downstream | 288031 | 50119669 ~ 50124620 (-) | True | evx2 |
| XM_036974455.1 | mRNA | downstream | 312954 | 50084100 ~ 50099697 (-) | True | lnpa |
| XM_036974456.1 | mRNA | downstream | 312964 | 50084100 ~ 50099687 (-) | False | lnpa |
| XM_036974458.1 | mRNA | downstream | 313100 | 50084100 ~ 50099551 (-) | False | lnpa |
| XM_021597228.2 | mRNA | upstream | 27031 | 50440201 ~ 50442930 (-) | False | LOC110520139 |
| XM_021597239.2 | mRNA | upstream | 107095 | 50520265 ~ 50525331 (-) | True | prkra |
| XM_021597241.2 | mRNA | upstream | 120909 | 50534079 ~ 50542111 (-) | False | LOC110520142 |
| XM_021597240.2 | mRNA | upstream | 120909 | 50534079 ~ 50542288 (-) | False | LOC110520142 |
| XM_021597242.2 | mRNA | upstream | 120909 | 50534079 ~ 50542288 (-) | False | LOC110520142 |
| TU305117 | other | downstream | 511113 | 49900173 ~ 49901538 (-) | True | LOC110520121 |
| TU305027 | other | downstream | 541006 | 49867217 ~ 49871645 (-) | True | LOC110520119 |
| TU304905 | other | downstream | 845177 | 49563848 ~ 49567474 (-) | True | LOC110520112 |
| TU304903 | other | downstream | 846662 | 49563848 ~ 49565989 (-) | False | LOC110520112 |
| TU304858 | other | downstream | 909680 | 49502416 ~ 49502971 (-) | True | LOC118944672 |
| TU306341 | other | upstream | 27035 | 50440205 ~ 50442872 (-) | True | LOC110520139 |
| TU306786 | other | upstream | 715270 | 51128440 ~ 51129310 (-) | True | LOC110520160 |
| TU307414 | other | upstream | 1060154 | 51473324 ~ 51474139 (-) | True | fgf9 |
| TU307458 | other | upstream | 1184229 | 51597399 ~ 51599898 (-) | False | il1rl1 |
| TU307459 | other | upstream | 1184765 | 51597935 ~ 51600230 (-) | True | il1rl1 |
