RNA id: TU259168



Basic Information


Item Value
RNA id TU259168
length 205
lncRNA type intronic
GC content 0.43
exon number 2
gene id G226571
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 13900363 ~ 13900743 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aatgccctatatgtggcctaatgttaggtgcaccagcccagtctaatgccctatatgtggcctaatgttagGTGCACCAGCCCggtctaatgccctatatgtggcctaatgttaggtgcaccagcccggtctaatgccctatatgtggcctaatgttaggtgcaccagcccagtctaatgccctatatgtggcctaatgttaggt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU259100 lncRNA downstream 41524 13847444 ~ 13858839 (-) True G226524
TU259055 lncRNA downstream 89011 13748139 ~ 13811352 (-) True G226484
TU259067 lncRNA downstream 115604 13780831 ~ 13784759 (-) False G226492
TU259063 lncRNA downstream 115604 13781619 ~ 13784759 (-) False G226492
TU259064 lncRNA downstream 115604 13781619 ~ 13784759 (-) False G226492
TU259190 lncRNA upstream 80594 13981337 ~ 13981641 (-) True G226593
TU259191 lncRNA upstream 81147 13981890 ~ 13982242 (-) True G226594
TU259193 lncRNA upstream 82743 13983486 ~ 13983797 (-) True G226596
TU259194 lncRNA upstream 83134 13983877 ~ 13984102 (-) True G226597
TU259202 lncRNA upstream 132878 14033621 ~ 14033969 (-) True G226605
XM_036975408.1 mRNA downstream 16804 13743533 ~ 13883559 (-) False LOC110510240
XM_036975407.1 mRNA downstream 124798 13743533 ~ 13775565 (-) False LOC110510240
XM_036975411.1 mRNA downstream 124798 13743533 ~ 13775565 (-) False LOC110510240
XM_036975410.1 mRNA downstream 124798 13745213 ~ 13775565 (-) False LOC110510240
XM_036975412.1 mRNA downstream 124798 13745213 ~ 13775565 (-) True LOC110510240
XM_021591709.2 mRNA upstream 5602 13906345 ~ 13909374 (-) True LOC110510306
XM_021582128.2 mRNA upstream 9003 13909746 ~ 13927854 (-) False wu:fe05a04
XM_036975395.1 mRNA upstream 9003 13909746 ~ 13927861 (-) False wu:fe05a04
XM_021591719.2 mRNA upstream 31104 13931847 ~ 13940405 (-) False LOC110510327
XM_021591718.2 mRNA upstream 31104 13931847 ~ 13940558 (-) True LOC110510327
TU258842 other downstream 555988 13344074 ~ 13344375 (-) True G226294
TU258769 other downstream 675848 13223884 ~ 13224515 (-) True G226224
TU258728 other downstream 720091 13177178 ~ 13180272 (-) True G226187
TU258665 other downstream 833006 13066873 ~ 13067357 (-) True G226124
TU257501 other downstream 1427303 12472299 ~ 12473060 (-) True G225171
TU259125 other upstream 25931 13926674 ~ 13927833 (-) True wu:fe05a04
TU259117 other upstream 98993 13999736 ~ 14001808 (-) True LOC110538195
TU259726 other upstream 528050 14428793 ~ 14475166 (-) True G227060
TU259714 other upstream 622437 14523180 ~ 14524854 (-) False psenen
TU259715 other upstream 622513 14523256 ~ 14524854 (-) True psenen

Expression Profile