RNA id: TU321611



Basic Information


Item Value
RNA id TU321611
length 181
lncRNA type read_through
GC content 0.33
exon number 2
gene id G283587
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 62248247 ~ 62254684 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGCTTGATGAATCTTGCCTGAAATAAGCAGTTTTTACTTttggaaaaaaaagaaagaaagtaaAAAAACTCAGGTAAGTGCAACTACAATGTCAAAATCCACTCCTGGTGACATGTTTTCAGCAATAGCAGAGATGATAAGGAGCACTTGGGTTCgaatcaacaacatttttttttttttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU321562 lncRNA downstream 96757 62148317 ~ 62151490 (-) False G283541
TU321561 lncRNA downstream 96757 62150524 ~ 62151490 (-) True G283541
TU321411 lncRNA downstream 343053 61897733 ~ 61905194 (-) True G283398
TU321383 lncRNA downstream 398548 61845415 ~ 61849699 (-) True G283373
TU321287 lncRNA downstream 549928 61693218 ~ 61698319 (-) True G283282
TU321614 lncRNA upstream 14540 62269224 ~ 62271259 (-) True G283589
TU321724 lncRNA upstream 158032 62412716 ~ 62413039 (-) True G283697
TU321936 lncRNA upstream 223850 62478534 ~ 62480130 (-) True G283899
TU322013 lncRNA upstream 359987 62614671 ~ 62621593 (-) True G283973
TU322014 lncRNA upstream 369524 62624208 ~ 62624555 (-) True G283974
XM_021597585.2 mRNA downstream 60160 62180497 ~ 62188087 (-) True LOC110520336
XM_021597587.2 mRNA downstream 73084 62164843 ~ 62175163 (-) True LOC110520337
XM_021597591.2 mRNA downstream 73933 62164843 ~ 62174314 (-) False LOC110520337
XM_021597589.2 mRNA downstream 76445 62164843 ~ 62171802 (-) False LOC110520337
XM_021597590.2 mRNA downstream 78530 62164843 ~ 62169717 (-) False LOC110520337
XM_021597602.2 mRNA upstream 171000 62425684 ~ 62533307 (-) False LOC110520347
XM_021597603.2 mRNA upstream 171000 62425684 ~ 62533307 (-) False LOC110520347
XM_021597604.2 mRNA upstream 171000 62425684 ~ 62533307 (-) False LOC110520347
XM_021597605.2 mRNA upstream 171000 62425684 ~ 62533307 (-) False LOC110520347
XM_021597606.2 mRNA upstream 171000 62425684 ~ 62533307 (-) False LOC110520347
TU315276 other downstream 4659064 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 4844672 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 4950485 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312498 other downstream 6836760 55410143 ~ 55411487 (-) False G275250
TU322065 other upstream 459891 62714575 ~ 62715177 (-) True G284018
TU324819 other upstream 2714865 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 2759575 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 2800016 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 2800016 65054700 ~ 65075985 (-) True G286638

Expression Profile