RNA id: TU321724



Basic Information


Item Value
RNA id TU321724
length 324
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G283697
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 62412716 ~ 62413039 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tctctggagagacctgaaaatagctgtgcagcgatgctccccatccaacctgacagagcttgagaggatctgcaaagaagaatgggagaaactccccaaatacaggtgtgccaagcttgaagagaagactcgaggctgtaatcgctgctaaaggtgcttcaagtTCAATTGaagaggctttattggcatgggaaacatatgttaacattgccaaagcaagtgaagtagataatatacaaaagtgaaataaacaataaaaatgaacagcaaGCATTACACTCACTGAAGttctgagtaaaggatctgaaactattgagtaaaggg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU321614 lncRNA downstream 141457 62269224 ~ 62271259 (-) True G283589
TU321611 lncRNA downstream 158032 62248247 ~ 62254684 (-) True G283587
TU321562 lncRNA downstream 261226 62148317 ~ 62151490 (-) False G283541
TU321561 lncRNA downstream 261226 62150524 ~ 62151490 (-) True G283541
TU321411 lncRNA downstream 507522 61897733 ~ 61905194 (-) True G283398
TU321936 lncRNA upstream 65495 62478534 ~ 62480130 (-) True G283899
TU322013 lncRNA upstream 201632 62614671 ~ 62621593 (-) True G283973
TU322014 lncRNA upstream 211169 62624208 ~ 62624555 (-) True G283974
TU322031 lncRNA upstream 239002 62652041 ~ 62652651 (-) True G283989
TU322033 lncRNA upstream 239639 62652678 ~ 62653109 (-) True G283990
XM_021597597.2 mRNA downstream 163215 62231915 ~ 62249501 (-) True LOC110520342
XM_021597585.2 mRNA downstream 224629 62180497 ~ 62188087 (-) True LOC110520336
XM_021597587.2 mRNA downstream 237553 62164843 ~ 62175163 (-) True LOC110520337
XM_021597591.2 mRNA downstream 238402 62164843 ~ 62174314 (-) False LOC110520337
XM_021597602.2 mRNA upstream 12645 62425684 ~ 62533307 (-) False LOC110520347
XM_021597603.2 mRNA upstream 12645 62425684 ~ 62533307 (-) False LOC110520347
XM_021597604.2 mRNA upstream 12645 62425684 ~ 62533307 (-) False LOC110520347
XM_021597605.2 mRNA upstream 12645 62425684 ~ 62533307 (-) False LOC110520347
XM_021597606.2 mRNA upstream 12645 62425684 ~ 62533307 (-) False LOC110520347
TU315276 other downstream 4823533 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 5009141 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 5114954 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312498 other downstream 7001229 55410143 ~ 55411487 (-) False G275250
TU322065 other upstream 301536 62714575 ~ 62715177 (-) True G284018
TU324819 other upstream 2556510 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 2601220 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 2641661 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 2641661 65054700 ~ 65075985 (-) True G286638

Expression Profile