RNA id: TCONS_00030749


Basic Information

Item Value
RNA id TCONS_00030749
length 98
RNA type miRNA
GC content 0.61
exon number 1
gene id XLOC_015356
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 19575059 ~ 19575156 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

caggtttTCTGGCTTGACGTCTCGGTGCAGGACGCggcggctctcgcagtgtttcaGCGCCGcaatcagctgcaccagcactttcttggccagaGGCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000182507

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00030748 lncRNA upstream 12568 19559074 ~ 19562491 (+) True XLOC_015355
TCONS_00030741 lncRNA upstream 331715 19237363 ~ 19243344 (+) True XLOC_015351
TCONS_00030733 lncRNA upstream 584358 18990177 ~ 18990701 (+) True XLOC_015348
TCONS_00030732 lncRNA upstream 584540 18988421 ~ 18990519 (+) False XLOC_015348
TCONS_00030729 lncRNA upstream 1168942 18405569 ~ 18406117 (+) True XLOC_015346
TCONS_00033513 lncRNA downstream 14888 19590044 ~ 19595194 (+) True XLOC_015358
TCONS_00033253 lncRNA downstream 39797 19614953 ~ 19616789 (+) True XLOC_015359
TCONS_00033514 lncRNA downstream 65796 19640952 ~ 19649341 (+) False XLOC_015362
TCONS_00033515 lncRNA downstream 84554 19659710 ~ 19679329 (+) True XLOC_015363
TCONS_00033254 lncRNA downstream 896994 20472150 ~ 20473316 (+) False XLOC_015368
TCONS_00030747 mRNA upstream 11640 19559047 ~ 19563419 (+) False XLOC_015355
TCONS_00030746 mRNA upstream 50812 19522082 ~ 19524247 (+) True XLOC_015354
TCONS_00030743 mRNA upstream 66923 19505263 ~ 19508136 (+) False XLOC_015352
TCONS_00030742 mRNA upstream 66923 19505263 ~ 19508136 (+) False XLOC_015352
TCONS_00030738 mRNA upstream 300394 19236677 ~ 19274665 (+) False XLOC_015351
TCONS_00030750 mRNA downstream 2923 19578079 ~ 19580088 (+) False XLOC_015357
TCONS_00030751 mRNA downstream 3290 19578446 ~ 19580242 (+) True XLOC_015357
TCONS_00030753 mRNA downstream 58337 19633493 ~ 19635654 (+) True XLOC_015361
TCONS_00030755 mRNA downstream 201990 19777146 ~ 19795593 (+) False XLOC_015364
TCONS_00030757 mRNA downstream 210384 19785540 ~ 19791535 (+) False XLOC_015364
TCONS_00030745 other upstream 55877 19519085 ~ 19519182 (+) True XLOC_015353
TCONS_00030744 other upstream 67866 19505290 ~ 19507193 (+) True XLOC_015352
TCONS_00030730 other upstream 1072635 18502308 ~ 18502424 (+) True XLOC_015347
TCONS_00030726 other upstream 1916983 17657958 ~ 17658076 (+) True XLOC_015342
TCONS_00030715 other upstream 2745295 16829689 ~ 16829764 (+) True XLOC_015330
TCONS_00030752 other downstream 53541 19628697 ~ 19628794 (+) True XLOC_015360
TCONS_00030754 other downstream 65796 19640952 ~ 19649341 (+) True XLOC_015362
TCONS_00030756 other downstream 209803 19784959 ~ 19793770 (+) False XLOC_015364
TCONS_00030758 other downstream 215529 19790685 ~ 19793781 (+) True XLOC_015364
TCONS_00030771 other downstream 1057065 20632221 ~ 20633527 (+) True XLOC_015371