Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU443434 |
| length | 540 |
| lncRNA type | sense_over |
| GC content | 0.48 |
| exon number | 2 |
| gene id | LOC110523612 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 32333502 ~ 32336514 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU443407 | lncRNA | upstream | 15166 | 32318155 ~ 32318369 (+) | True | G390610 |
| TU443242 | lncRNA | upstream | 20173 | 32313137 ~ 32313362 (+) | True | G390450 |
| TU443238 | lncRNA | upstream | 28706 | 32304606 ~ 32304829 (+) | True | G390446 |
| TU443186 | lncRNA | upstream | 109438 | 32223748 ~ 32224097 (+) | True | G390396 |
| TU443184 | lncRNA | upstream | 111100 | 32222227 ~ 32222435 (+) | True | G390394 |
| TU443435 | lncRNA | downstream | 310 | 32334608 ~ 32336514 (+) | True | LOC110523612 |
| TU443466 | lncRNA | downstream | 68528 | 32402826 ~ 32403113 (+) | True | G390649 |
| TU443520 | lncRNA | downstream | 202115 | 32536413 ~ 32536927 (+) | True | G390700 |
| TU443554 | lncRNA | downstream | 272857 | 32607155 ~ 32623203 (+) | True | LOC110523621 |
| TU443594 | lncRNA | downstream | 319404 | 32653702 ~ 32654170 (+) | True | LOC118964584 |
| XM_021602468.2 | mRNA | upstream | 62753 | 32257928 ~ 32270782 (+) | False | lhx3 |
| XM_021602467.2 | mRNA | upstream | 62753 | 32260648 ~ 32270782 (+) | False | lhx3 |
| XM_021602466.2 | mRNA | upstream | 62753 | 32260650 ~ 32270782 (+) | True | lhx3 |
| XR_002473470.2 | mRNA | upstream | 173118 | 32152908 ~ 32160417 (+) | False | LOC110523608 |
| XM_036977274.1 | mRNA | upstream | 1361192 | 30966139 ~ 30972343 (+) | False | LOC110522913 |
| XM_036977284.1 | mRNA | downstream | 6578 | 32340876 ~ 32390222 (+) | False | LOC110523614 |
| XM_036977285.1 | mRNA | downstream | 6578 | 32340876 ~ 32390222 (+) | False | LOC110523614 |
| XM_036977287.1 | mRNA | downstream | 6578 | 32340876 ~ 32390222 (+) | False | LOC110523614 |
| XM_036977286.1 | mRNA | downstream | 33340 | 32367638 ~ 32390222 (+) | True | LOC110523614 |
| XM_021602472.2 | mRNA | downstream | 70200 | 32404498 ~ 32485105 (+) | False | nup214 |
| TU443183 | other | upstream | 113002 | 32220181 ~ 32220533 (+) | True | G390393 |
| TU442960 | other | upstream | 372790 | 31960355 ~ 31960745 (+) | True | G390184 |
| TU440680 | other | upstream | 2045711 | 30286951 ~ 30287824 (+) | True | G388019 |
| TU440079 | other | upstream | 2435401 | 29896986 ~ 29898134 (+) | True | G387516 |
| TU439971 | other | upstream | 2587341 | 29741800 ~ 29746194 (+) | True | tbx5a |
| TU444420 | other | downstream | 824528 | 33158826 ~ 33162980 (+) | True | G391513 |
| TU444741 | other | downstream | 1026659 | 33360957 ~ 33361341 (+) | True | G391805 |
| TU445804 | other | downstream | 1813176 | 34147474 ~ 34148701 (+) | False | G392776 |
| TU448046 | other | downstream | 3570814 | 35905112 ~ 35905781 (+) | True | G394882 |
| TU448080 | other | downstream | 3632639 | 35966937 ~ 36004829 (+) | True | G394910 |
