Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU425539 |
| length | 216 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G374291 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 18182479 ~ 18182694 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU425341 | lncRNA | upstream | 1381 | 18179542 ~ 18181098 (+) | False | G374120 |
| TU425342 | lncRNA | upstream | 1381 | 18179542 ~ 18181098 (+) | True | G374120 |
| TU425384 | lncRNA | upstream | 59864 | 18121391 ~ 18122615 (+) | True | G374157 |
| TU425324 | lncRNA | upstream | 133271 | 18048939 ~ 18049208 (+) | True | G374105 |
| TU425325 | lncRNA | upstream | 147865 | 18033872 ~ 18034614 (+) | True | G374106 |
| TU425540 | lncRNA | downstream | 56 | 18182750 ~ 18183159 (+) | True | G374292 |
| TU425564 | lncRNA | downstream | 21686 | 18204380 ~ 18204663 (+) | True | G374316 |
| TU425579 | lncRNA | downstream | 41035 | 18223729 ~ 18223994 (+) | True | G374331 |
| TU425607 | lncRNA | downstream | 63686 | 18246380 ~ 18246703 (+) | True | G374359 |
| TU425609 | lncRNA | downstream | 65358 | 18248052 ~ 18248288 (+) | True | G374361 |
| XM_036976985.1 | mRNA | upstream | 5444 | 18067350 ~ 18177035 (+) | False | arhgef28a |
| XM_036976986.1 | mRNA | upstream | 5444 | 18067350 ~ 18177035 (+) | False | arhgef28a |
| XM_036976987.1 | mRNA | upstream | 5444 | 18067350 ~ 18177035 (+) | False | arhgef28a |
| XM_036976988.1 | mRNA | upstream | 5444 | 18067350 ~ 18177035 (+) | False | arhgef28a |
| XM_021601990.2 | mRNA | upstream | 134848 | 18040727 ~ 18047631 (+) | True | btf3 |
| XR_002473438.2 | mRNA | downstream | 213634 | 18396328 ~ 18410126 (+) | False | LOC110523365 |
| XM_021601996.2 | mRNA | downstream | 213637 | 18396331 ~ 18410126 (+) | False | LOC110523365 |
| XM_036976990.1 | mRNA | downstream | 213961 | 18396655 ~ 18410126 (+) | True | LOC110523365 |
| XM_021601997.2 | mRNA | downstream | 233080 | 18415774 ~ 18422258 (+) | True | LOC110523366 |
| XM_021602001.2 | mRNA | downstream | 304926 | 18487620 ~ 18506142 (+) | False | egfl7 |
| TU425343 | other | upstream | 99114 | 18067443 ~ 18083365 (+) | True | arhgef28a |
| TU424889 | other | upstream | 474722 | 17704113 ~ 17707757 (+) | True | G373726 |
| TU423600 | other | upstream | 1300294 | 16870434 ~ 16882185 (+) | False | G372618 |
| TU423601 | other | upstream | 1300294 | 16870434 ~ 16882185 (+) | True | G372618 |
| TU423245 | other | upstream | 1443979 | 16735642 ~ 16738500 (+) | True | G372373 |
| TU427802 | other | downstream | 1800567 | 19983261 ~ 19983848 (+) | True | G376320 |
| TU428545 | other | downstream | 2408786 | 20591480 ~ 20596863 (+) | True | G377022 |
| TU428462 | other | downstream | 2560890 | 20743584 ~ 20758501 (+) | True | LOC110522816 |
| TU428679 | other | downstream | 2648564 | 20831258 ~ 20836559 (+) | True | LOC110522817 |
| TU428818 | other | downstream | 2925475 | 21108169 ~ 21158919 (+) | False | LOC110523400 |
