Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU428788 |
| length | 665 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G377241 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21022705 ~ 21023369 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU428787 | lncRNA | upstream | 2798 | 21019662 ~ 21019907 (+) | True | G377240 |
| TU428726 | lncRNA | upstream | 25997 | 20993705 ~ 20996708 (+) | True | G377184 |
| TU428731 | lncRNA | upstream | 29729 | 20946529 ~ 20992976 (+) | True | G377188 |
| TU428725 | lncRNA | upstream | 78667 | 20943592 ~ 20944038 (+) | True | ccar2 |
| TU428741 | lncRNA | upstream | 100610 | 20921877 ~ 20922095 (+) | True | G377198 |
| TU428790 | lncRNA | downstream | 1595 | 21024964 ~ 21025268 (+) | True | G377243 |
| TU428798 | lncRNA | downstream | 10573 | 21033942 ~ 21034516 (+) | True | G377251 |
| TU428812 | lncRNA | downstream | 20320 | 21043689 ~ 21043996 (+) | True | G377261 |
| TU428824 | lncRNA | downstream | 48005 | 21071374 ~ 21071582 (+) | True | G377272 |
| TU428805 | lncRNA | downstream | 76962 | 21100331 ~ 21103100 (+) | True | G377255 |
| XM_021602064.2 | mRNA | upstream | 31329 | 20952149 ~ 20991376 (+) | False | LOC110523398 |
| XM_021602063.2 | mRNA | upstream | 31364 | 20952149 ~ 20991341 (+) | False | LOC110523398 |
| XM_021602062.2 | mRNA | upstream | 40302 | 20952150 ~ 20982403 (+) | False | LOC110523398 |
| XM_021602065.2 | mRNA | upstream | 40304 | 20952166 ~ 20982401 (+) | True | LOC110523398 |
| XM_021602060.2 | mRNA | upstream | 78662 | 20923014 ~ 20944043 (+) | False | ccar2 |
| XM_036977026.1 | mRNA | downstream | 27567 | 21050936 ~ 21099289 (+) | True | LOC110522819 |
| XM_021602067.2 | mRNA | downstream | 84760 | 21108129 ~ 21160140 (+) | False | LOC110523400 |
| XM_021602076.2 | mRNA | downstream | 254199 | 21277568 ~ 21288531 (+) | True | npm2b |
| XM_021602081.2 | mRNA | downstream | 450484 | 21473853 ~ 21477171 (+) | True | LOC110523406 |
| XM_036977038.1 | mRNA | downstream | 455316 | 21478685 ~ 21493435 (+) | False | LOC110523407 |
| TU428679 | other | upstream | 186146 | 20831258 ~ 20836559 (+) | True | LOC110522817 |
| TU428462 | other | upstream | 264204 | 20743584 ~ 20758501 (+) | True | LOC110522816 |
| TU428545 | other | upstream | 425842 | 20591480 ~ 20596863 (+) | True | G377022 |
| TU427802 | other | upstream | 1038857 | 19983261 ~ 19983848 (+) | True | G376320 |
| TU425343 | other | upstream | 2939340 | 18067443 ~ 18083365 (+) | True | arhgef28a |
| TU428818 | other | downstream | 84800 | 21108169 ~ 21158919 (+) | False | LOC110523400 |
| TU430417 | other | downstream | 1149166 | 22172535 ~ 22231920 (+) | False | G378660 |
| TU430418 | other | downstream | 1149166 | 22172535 ~ 22231920 (+) | True | G378660 |
| TU430626 | other | downstream | 1480383 | 22503752 ~ 22506270 (+) | True | G378832 |
| TU430672 | other | downstream | 1578741 | 22602110 ~ 22629669 (+) | True | G378868 |
