Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU539550 |
| length | 215 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G474577 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 11928221 ~ 11928435 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU539549 | lncRNA | downstream | 598 | 11927384 ~ 11927623 (-) | True | G474576 |
| TU539543 | lncRNA | downstream | 11474 | 11916517 ~ 11916747 (-) | True | G474571 |
| TU539509 | lncRNA | downstream | 18071 | 11909197 ~ 11910150 (-) | True | G474537 |
| TU539535 | lncRNA | downstream | 21362 | 11906644 ~ 11906859 (-) | True | G474563 |
| TU539533 | lncRNA | downstream | 27091 | 11900914 ~ 11901130 (-) | True | G474561 |
| TU539556 | lncRNA | upstream | 7848 | 11936283 ~ 11936547 (-) | True | G474583 |
| TU539506 | lncRNA | upstream | 20616 | 11949051 ~ 11949388 (-) | True | G474535 |
| TU539578 | lncRNA | upstream | 80367 | 12008802 ~ 12010106 (-) | True | G474605 |
| TU539587 | lncRNA | upstream | 91287 | 12019722 ~ 12019950 (-) | True | G474609 |
| TU539605 | lncRNA | upstream | 129607 | 12058042 ~ 12058479 (-) | True | G474627 |
| XM_021605246.2 | mRNA | downstream | 105611 | 11808873 ~ 11822610 (-) | True | hsd17b4 |
| XM_036979395.1 | mRNA | downstream | 206876 | 11629016 ~ 11721345 (-) | False | LOC110525095 |
| XM_036979396.1 | mRNA | downstream | 206876 | 11629016 ~ 11721345 (-) | True | LOC110525095 |
| XM_036979399.1 | mRNA | downstream | 206877 | 11629016 ~ 11721344 (-) | False | LOC110525095 |
| XM_021605258.2 | mRNA | upstream | 26782 | 11955217 ~ 11977893 (-) | False | LOC110525267 |
| XM_021605261.2 | mRNA | upstream | 26782 | 11955217 ~ 11979389 (-) | False | LOC110525267 |
| XM_021605256.2 | mRNA | upstream | 26782 | 11955217 ~ 11979392 (-) | False | LOC110525267 |
| XM_021605257.2 | mRNA | upstream | 26782 | 11955217 ~ 11979393 (-) | False | LOC110525267 |
| XM_021605254.2 | mRNA | upstream | 26782 | 11955217 ~ 11979394 (-) | False | LOC110525267 |
| TU538887 | other | downstream | 185463 | 11742202 ~ 11742758 (-) | True | G474030 |
| TU538785 | other | downstream | 326224 | 11601515 ~ 11601997 (-) | True | G473930 |
| TU538397 | other | downstream | 543775 | 11379527 ~ 11384446 (-) | True | LOC110525252 |
| TU537285 | other | downstream | 1448375 | 10476409 ~ 10479846 (-) | True | G472576 |
| TU537244 | other | downstream | 1552144 | 10373852 ~ 10376077 (-) | True | G472539 |
| TU539498 | other | upstream | 26831 | 11955266 ~ 11956537 (-) | True | LOC110525267 |
| TU539592 | other | upstream | 100724 | 12029159 ~ 12029610 (-) | True | G474614 |
| TU539726 | other | upstream | 496026 | 12424461 ~ 12425235 (-) | True | LOC110525279 |
| TU540491 | other | upstream | 1023817 | 12952252 ~ 12954051 (-) | True | G475413 |
| TU540518 | other | upstream | 1100950 | 13029385 ~ 13046261 (-) | True | LOC110525296 |
