RNA id: TU785264



Basic Information


Item Value
RNA id TU785264
length 298
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G689681
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 25408672 ~ 25408969 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACACACAAACCATacccaccacacatacacacaaaccatacccaccacacatacacacaaaccatacccaccacacatacacacaaaccataccctacacacatacacacaaaccatacccaccacacatacacacaaaccatACCCTACACACAAACCATACCCTACACACAAACCATacccaccacacatacacacaaaccatacccaccacacatacacacaaaccatacccaccacacatacacacaaaccatacccaccacacatacacacaaaccataccctacacacaaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU785263 lncRNA downstream 600 25407797 ~ 25408072 (-) True G689680
TU785260 lncRNA downstream 9087 25399275 ~ 25399585 (-) True G689677
TU785242 lncRNA downstream 63450 25344878 ~ 25345222 (-) True G689659
TU785194 lncRNA downstream 91075 25252752 ~ 25317597 (-) True G689620
TU785221 lncRNA downstream 102250 25305639 ~ 25306422 (-) True G689644
TU785266 lncRNA upstream 760 25409729 ~ 25409976 (-) True G689683
TU785267 lncRNA upstream 1020 25409989 ~ 25410308 (-) True G689684
TU785270 lncRNA upstream 3109 25412078 ~ 25412457 (-) True G689687
TU785271 lncRNA upstream 3881 25412850 ~ 25413128 (-) True G689688
TU785315 lncRNA upstream 105432 25514401 ~ 25515154 (-) True G689728
XM_021612107.2 mRNA downstream 82374 25323627 ~ 25326298 (-) True LOC110529676
XM_021612109.2 mRNA downstream 87860 25310439 ~ 25320812 (-) True LOC110529677
XM_021612108.2 mRNA downstream 87874 25310439 ~ 25320798 (-) False LOC110529677
XM_021612111.2 mRNA downstream 98889 25307431 ~ 25309783 (-) False LOC110529678
XM_021612112.2 mRNA upstream 7308 25416277 ~ 25490274 (-) False LOC110529680
XM_021612113.2 mRNA upstream 7308 25416277 ~ 25490274 (-) True LOC110529680
XM_021612115.2 mRNA upstream 88604 25497573 ~ 25503434 (-) False LOC110529682
XM_021612114.2 mRNA upstream 88604 25497573 ~ 25503435 (-) True LOC110529682
XM_021612136.2 mRNA upstream 335055 25744024 ~ 25758345 (-) False LOC110529692
TU785239 other downstream 1325 25376122 ~ 25407347 (-) True G689656
TU784591 other downstream 410837 24996765 ~ 24997835 (-) True LOC110529665
TU784418 other downstream 671632 24736046 ~ 24737040 (-) True G688922
TU784009 other downstream 727246 24680967 ~ 24681426 (-) True G688537
TU783950 other downstream 777623 24629554 ~ 24631049 (-) True G688480
TU785268 other upstream 1854 25410823 ~ 25411132 (-) True G689685
TU785308 other upstream 108597 25517566 ~ 25521288 (-) False G689723
TU785310 other upstream 109494 25518463 ~ 25521288 (-) False G689723
TU785403 other upstream 255196 25664165 ~ 25664665 (-) True G689810
TU785453 other upstream 392995 25801964 ~ 25805475 (-) False LOC110529694

Expression Profile