RNA id: TCONS_00035698


Basic Information

Item Value
RNA id TCONS_00035698
length 353
RNA type processed_transcript
GC content 0.40
exon number 2
gene id XLOC_018110
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 26543683 ~ 26551233 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

accatcaaaTGACAGTTGTGAATATTTCAAAAGAAATACAAAGTAGGCTGCAATATTCGCACAATGTAACTATTTTAGTGTCCGCTAATAACGCCTGCTCCTGTGAGTTCAAATGAATACTGCAATGTGAGTAAGTGTGTGACGGTTTTAGTGAGAAAGACTATTAAGCCTTGTCTCGCCTTGTCACTCCGTTAATTCTCACCTATTACATTGTATTTTCATGTTAGACGCCTTTTTTCGTGTCAAGCTTTTTTACGACAGTCTCTGGATTTGCTCAAACCGAAAGTGTCAGGACGCACAGTGCTAAAACCGATACCATAGACGAAAGCCTGGACAAAACGTGTATCTTCTGT

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0016787 hydrolase activity molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041001-132 Predicted to enable hydrolase activity and nucleotide binding activity. Predicted to be located in cytoplasm and nucleus. Orthologous to human HINT3 (histidine triad nucleotide binding protein 3).

Ensembl:

ensembl_id ENSDART00000135038

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036844 lncRNA downstream 27447 26480062 ~ 26523214 (-) False XLOC_018108
TCONS_00036843 lncRNA downstream 92280 26445903 ~ 26458381 (-) True XLOC_018107
TCONS_00036842 lncRNA downstream 479712 26062545 ~ 26070949 (-) True XLOC_018101
TCONS_00035653 lncRNA downstream 838246 25710791 ~ 25712415 (-) True XLOC_018092
TCONS_00036841 lncRNA downstream 880739 25666049 ~ 25669922 (-) False XLOC_018091
TCONS_00036846 lncRNA upstream 79837 26631070 ~ 26708482 (-) False XLOC_018112
TCONS_00036847 lncRNA upstream 79837 26631070 ~ 26708526 (-) True XLOC_018112
TCONS_00036848 lncRNA upstream 380835 26932068 ~ 26935771 (-) False XLOC_018115
TCONS_00035712 lncRNA upstream 383769 26935002 ~ 26935771 (-) True XLOC_018115
TCONS_00035713 lncRNA upstream 408300 26959533 ~ 26962756 (-) True XLOC_018116
TCONS_00035693 mRNA downstream 13490 26535342 ~ 26537171 (-) False XLOC_018109
TCONS_00035694 mRNA downstream 14080 26535700 ~ 26536581 (-) True XLOC_018109
TCONS_00035688 mRNA downstream 18494 26478197 ~ 26532167 (-) False XLOC_018108
TCONS_00035687 mRNA downstream 18811 26478197 ~ 26531850 (-) False XLOC_018108
TCONS_00035692 mRNA downstream 18811 26525249 ~ 26531850 (-) True XLOC_018108
TCONS_00035699 mRNA upstream 21223 26572456 ~ 26624042 (-) False XLOC_018111
TCONS_00035700 mRNA upstream 25140 26576373 ~ 26588736 (-) False XLOC_018111
TCONS_00035702 mRNA upstream 157776 26709009 ~ 26822550 (-) False XLOC_018113
TCONS_00035703 mRNA upstream 157778 26709011 ~ 26822550 (-) False XLOC_018113
TCONS_00035704 mRNA upstream 224579 26775812 ~ 26822522 (-) False XLOC_018113
TCONS_00035691 other downstream 39388 26502486 ~ 26511273 (-) False XLOC_018108
TCONS_00035690 other downstream 61716 26480428 ~ 26488945 (-) False XLOC_018108
TCONS_00035681 other downstream 158704 26390795 ~ 26391957 (-) True XLOC_018105
TCONS_00035675 other downstream 355820 26194726 ~ 26194841 (-) True XLOC_018103
TCONS_00035674 other downstream 431202 26119339 ~ 26119459 (-) True XLOC_018102
TCONS_00035701 other upstream 32879 26584112 ~ 26588910 (-) True XLOC_018111
TCONS_00035715 other upstream 502862 27054095 ~ 27054220 (-) True XLOC_018118
TCONS_00035722 other upstream 673579 27224812 ~ 27225878 (-) True XLOC_018121
TCONS_00035726 other upstream 757183 27308416 ~ 27311615 (-) True XLOC_018122
TCONS_00035747 other upstream 2060039 28611272 ~ 28612322 (-) True XLOC_018136

Expression Profile

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