RNA id: TCONS_00035713


Basic Information

Item Value
RNA id TCONS_00035713
length 347
lncRNA type antisense
GC content 0.36
exon number 2
gene id XLOC_018116
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 26959533 ~ 26962756 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTTCtatttccatttttcttttatttgacaTACTGACCTGCTACAATGTATTGCATAGAATATGACTGCAAAAGAAAATGCTTTATTATTTACAGACCTCATCGAATCTCTGGTCAAAAACAGAGCAACAGGAACAGTTTCTGGGAGAAGGAAAGTGTCCATCCCTGTCCACTTTCCTTCAATGCCATCCTCCTTTTAAATACATCTGAGTCCATTATAAATAAGTGTCAATGGTAATACTTTGTTTTTGATTCCGAAGTCCCTGCATATTCATATCTTGATTTGCTTAAATATGAAGGATGGCAGCGTCAGCTTGACCATCTGAAGAGtcttaaaaatgtgcattt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000132441

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036848 lncRNA downstream 23762 26932068 ~ 26935771 (-) False XLOC_018115
TCONS_00035712 lncRNA downstream 23762 26935002 ~ 26935771 (-) True XLOC_018115
TCONS_00036847 lncRNA downstream 251007 26631070 ~ 26708526 (-) True XLOC_018112
TCONS_00036846 lncRNA downstream 251051 26631070 ~ 26708482 (-) False XLOC_018112
TCONS_00036845 lncRNA downstream 408300 26548237 ~ 26551233 (-) False XLOC_018110
TCONS_00035725 lncRNA upstream 341092 27303848 ~ 27304286 (-) False XLOC_018122
TCONS_00036849 lncRNA upstream 1152008 28114764 ~ 28154496 (-) False XLOC_018129
TCONS_00036850 lncRNA upstream 1152008 28114764 ~ 28164127 (-) False XLOC_018129
TCONS_00036851 lncRNA upstream 1152008 28114764 ~ 28164152 (-) True XLOC_018129
TCONS_00036852 lncRNA upstream 1270521 28233277 ~ 28233592 (-) True XLOC_018130
TCONS_00035711 mRNA downstream 22080 26931496 ~ 26937453 (-) False XLOC_018115
TCONS_00035710 mRNA downstream 22646 26928915 ~ 26936887 (-) False XLOC_018115
TCONS_00035709 mRNA downstream 29848 26920681 ~ 26929685 (-) False XLOC_018115
TCONS_00035707 mRNA downstream 93422 26827265 ~ 26866111 (-) False XLOC_018114
TCONS_00035706 mRNA downstream 113505 26827265 ~ 26846028 (-) False XLOC_018114
TCONS_00035714 mRNA upstream 86767 27049523 ~ 27086143 (-) True XLOC_018117
TCONS_00035716 mRNA upstream 128152 27090908 ~ 27092290 (-) True XLOC_018119
TCONS_00035717 mRNA upstream 152118 27114874 ~ 27152495 (-) False XLOC_018120
TCONS_00035718 mRNA upstream 152118 27114874 ~ 27190393 (-) True XLOC_018120
TCONS_00035719 mRNA upstream 260093 27222849 ~ 27225876 (-) False XLOC_018121
TCONS_00035701 other downstream 370623 26584112 ~ 26588910 (-) True XLOC_018111
TCONS_00035698 other downstream 408300 26550661 ~ 26551233 (-) True XLOC_018110
TCONS_00035691 other downstream 448260 26502486 ~ 26511273 (-) False XLOC_018108
TCONS_00035690 other downstream 470588 26480428 ~ 26488945 (-) False XLOC_018108
TCONS_00035681 other downstream 567576 26390795 ~ 26391957 (-) True XLOC_018105
TCONS_00035715 other upstream 91339 27054095 ~ 27054220 (-) True XLOC_018118
TCONS_00035722 other upstream 262056 27224812 ~ 27225878 (-) True XLOC_018121
TCONS_00035726 other upstream 345660 27308416 ~ 27311615 (-) True XLOC_018122
TCONS_00035747 other upstream 1648516 28611272 ~ 28612322 (-) True XLOC_018136
TCONS_00035753 other upstream 1870006 28832762 ~ 28842571 (-) False XLOC_018139