RNA id: TCONS_00035716


Basic Information

Item Value
RNA id TCONS_00035716
length 611
RNA type mRNA
GC content 0.39
exon number 2
gene id XLOC_018119
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 27090908 ~ 27092290 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGTTCGTTCAACATGGCAGCGTGCGAGCTGAAGGGAGAGCTGAAATACAGAGATGGACAGACGAACCAGTTTACAGCACAAGTGGATGGCAATTTGAAATCAATAATAGGTggcattaagaaaataaatggcGACATTTCAGAAGCCTTAACGACACTCGTTGAACAAGAAAAAGGCTCAACGGGAAATGACAGAGAGAGTGTTAATGATGATGAGGAAGAGGACAGCGATGATGATGATGGCAGTGCCACAAAAACCACCACCATCACCAAGTCAAGCTCAGAACCTCCAAGCAAGAAGATGAAAACTTTACGTTCATGATAAGCAGAACTCACATTAATCAGGCCTTTTTGCATACAGAGTTAATGTTGCCCTCCTccttaaaaaatctacttttatcCGCTAGTGACTTCAAGACAGTGTTGAGATTTTGCCTTATTTTGTTTCCATTCTGCAAgttattttacataaatttaGGTCCCTCCAAAAGGGAAACAATTTCATCGTTGCATTTTTTGTCCTGTTGTAAAAAGTTAAACATTGACAGCAGTTATCAGAACTTCAGCACACAATAATAAAATCATTGTGCAATAAACTGGATTCAAACCGTC

Function

GO:

id name namespace
GO:0000408 EKC/KEOPS complex cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-041001-118 Predicted to be part of EKC/KEOPS complex.

Ensembl:

ensembl_id ENSDART00000062096

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00035713 lncRNA downstream 128152 26959533 ~ 26962756 (-) True XLOC_018116
TCONS_00036848 lncRNA downstream 155137 26932068 ~ 26935771 (-) False XLOC_018115
TCONS_00035712 lncRNA downstream 155137 26935002 ~ 26935771 (-) True XLOC_018115
TCONS_00036847 lncRNA downstream 382382 26631070 ~ 26708526 (-) True XLOC_018112
TCONS_00036846 lncRNA downstream 382426 26631070 ~ 26708482 (-) False XLOC_018112
TCONS_00035725 lncRNA upstream 211558 27303848 ~ 27304286 (-) False XLOC_018122
TCONS_00036849 lncRNA upstream 1022474 28114764 ~ 28154496 (-) False XLOC_018129
TCONS_00036850 lncRNA upstream 1022474 28114764 ~ 28164127 (-) False XLOC_018129
TCONS_00036851 lncRNA upstream 1022474 28114764 ~ 28164152 (-) True XLOC_018129
TCONS_00036852 lncRNA upstream 1140987 28233277 ~ 28233592 (-) True XLOC_018130
TCONS_00035714 mRNA downstream 4765 27049523 ~ 27086143 (-) True XLOC_018117
TCONS_00035711 mRNA downstream 153455 26931496 ~ 26937453 (-) False XLOC_018115
TCONS_00035710 mRNA downstream 154021 26928915 ~ 26936887 (-) False XLOC_018115
TCONS_00035709 mRNA downstream 161223 26920681 ~ 26929685 (-) False XLOC_018115
TCONS_00035707 mRNA downstream 224797 26827265 ~ 26866111 (-) False XLOC_018114
TCONS_00035717 mRNA upstream 22584 27114874 ~ 27152495 (-) False XLOC_018120
TCONS_00035718 mRNA upstream 22584 27114874 ~ 27190393 (-) True XLOC_018120
TCONS_00035719 mRNA upstream 130559 27222849 ~ 27225876 (-) False XLOC_018121
TCONS_00035720 mRNA upstream 131131 27223421 ~ 27225878 (-) False XLOC_018121
TCONS_00035721 mRNA upstream 131756 27224046 ~ 27225064 (-) False XLOC_018121
TCONS_00035715 other downstream 36688 27054095 ~ 27054220 (-) True XLOC_018118
TCONS_00035701 other downstream 501998 26584112 ~ 26588910 (-) True XLOC_018111
TCONS_00035698 other downstream 539675 26550661 ~ 26551233 (-) True XLOC_018110
TCONS_00035691 other downstream 579635 26502486 ~ 26511273 (-) False XLOC_018108
TCONS_00035690 other downstream 601963 26480428 ~ 26488945 (-) False XLOC_018108
TCONS_00035722 other upstream 132522 27224812 ~ 27225878 (-) True XLOC_018121
TCONS_00035726 other upstream 216126 27308416 ~ 27311615 (-) True XLOC_018122
TCONS_00035747 other upstream 1518982 28611272 ~ 28612322 (-) True XLOC_018136
TCONS_00035753 other upstream 1740472 28832762 ~ 28842571 (-) False XLOC_018139
TCONS_00035760 other upstream 1779595 28871885 ~ 28875874 (-) False XLOC_018141

Expression Profile

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