Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00036351 |
| length | 1059 |
| RNA type | mRNA |
| GC content | 0.59 |
| exon number | 12 |
| gene id | XLOC_018524 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007131.7 |
| NCBI id | CM002904.2 |
| chromosome length | 55201332 |
| location | 54437053 ~ 54462551 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008154 | actin polymerization or depolymerization | biological_process |
| GO:0051289 | protein homotetramerization | biological_process |
| GO:0030838 | positive regulation of actin filament polymerization | biological_process |
| GO:0045010 | actin nucleation | biological_process |
| GO:0005856 | cytoskeleton | cellular_component |
| GO:0005522 | profilin binding | molecular_function |
| GO:0017124 | SH3 domain binding | molecular_function |
| GO:0003779 | actin binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-1804 | Predicted to enable SH3 domain binding activity and profilin binding activity. Predicted to be involved in actin polymerization or depolymerization and positive regulation of actin filament polymerization. Predicted to act upstream of or within actin nucleation and protein homotetramerization. Predicted to be located in cytoplasm; cytoskeleton; and lamellipodium. Is expressed in nervous system and trigeminal placode. Orthologous to human EVL (Enah/Vasp-like). |
| ensembl_id | ENSDART00000169692 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00037024 | lncRNA | downstream | 91641 | 54339711 ~ 54345412 (-) | True | XLOC_018521 |
| TCONS_00037022 | lncRNA | downstream | 165598 | 54270891 ~ 54271455 (-) | False | XLOC_018520 |
| TCONS_00037021 | lncRNA | downstream | 165599 | 54270891 ~ 54271454 (-) | False | XLOC_018520 |
| TCONS_00037023 | lncRNA | downstream | 165613 | 54271075 ~ 54271440 (-) | True | XLOC_018520 |
| TCONS_00036528 | lncRNA | downstream | 200621 | 54228676 ~ 54236432 (-) | True | XLOC_018518 |
| TCONS_00036529 | lncRNA | upstream | 21214 | 54483765 ~ 54488224 (-) | True | XLOC_018525 |
| TCONS_00037025 | lncRNA | upstream | 124088 | 54586639 ~ 54591398 (-) | False | XLOC_018529 |
| TCONS_00036530 | lncRNA | upstream | 127560 | 54590111 ~ 54610803 (-) | True | XLOC_018529 |
| TCONS_00037026 | lncRNA | upstream | 299970 | 54762521 ~ 54772668 (-) | True | XLOC_018530 |
| TCONS_00037027 | lncRNA | upstream | 425906 | 54888457 ~ 54890490 (-) | False | XLOC_018533 |
| TCONS_00036350 | mRNA | downstream | 1766 | 54419592 ~ 54435287 (-) | True | XLOC_018523 |
| TCONS_00036348 | mRNA | downstream | 56019 | 54360268 ~ 54381034 (-) | False | XLOC_018522 |
| TCONS_00036349 | mRNA | downstream | 59120 | 54360984 ~ 54377933 (-) | True | XLOC_018522 |
| TCONS_00036347 | mRNA | downstream | 177273 | 54249339 ~ 54259780 (-) | True | XLOC_018519 |
| TCONS_00036346 | mRNA | downstream | 191797 | 54213688 ~ 54245256 (-) | False | XLOC_018518 |
| TCONS_00036353 | mRNA | upstream | 43877 | 54506428 ~ 54508650 (-) | True | XLOC_018526 |
| TCONS_00036354 | mRNA | upstream | 49516 | 54512067 ~ 54522660 (-) | True | XLOC_018527 |
| TCONS_00036355 | mRNA | upstream | 62853 | 54525404 ~ 54564018 (-) | True | XLOC_018528 |
| TCONS_00036356 | mRNA | upstream | 366547 | 54829098 ~ 54869006 (-) | True | XLOC_018531 |
| TCONS_00036357 | mRNA | upstream | 411570 | 54874121 ~ 54924593 (-) | True | XLOC_018532 |
| TCONS_00036341 | other | downstream | 402510 | 54013424 ~ 54034543 (-) | True | XLOC_018509 |
| TCONS_00036338 | other | downstream | 425010 | 53996170 ~ 54012043 (-) | True | XLOC_018508 |
| TCONS_00036326 | other | downstream | 1001577 | 53408284 ~ 53435476 (-) | False | XLOC_018503 |
| TCONS_00036327 | other | downstream | 1001660 | 53408579 ~ 53435393 (-) | False | XLOC_018503 |
| TCONS_00036312 | other | downstream | 1609927 | 52827010 ~ 52827126 (-) | True | XLOC_018493 |
