RNA id: TCONS_00037773


Basic Information

Item Value
RNA id TCONS_00037773
length 777
RNA type processed_transcript
GC content 0.43
exon number 3
gene id XLOC_019045
representative True

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 32464568 ~ 32527344 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTTCTCTCGGGTATAACTGGTCGCTTCCATAGGTTGCTGATATTAATGTCAGATGGAGGTGGAGACATGGGCCTCTCCAGGTTATCATCATAGCTGAGAGCTCGACGGGTCATCCCAGCTGGGATAGACATCCCTCCGAGGAGACCCTCTGAAGAACCTGGACCTGCTTCCAGGGCTGagGTTTGAGGATGCGTCTCTTTGGAATAAGCGCATGTTTGTGCTGTACAAAAGAACTGAGAATCTGGACAGTCAGAGGAGCCTCTTGACCTTTTGAGTTACAGGGGCTGATGAACTCATGTAAGAAACCCCAGTAAACCATAAgtcTTGTGATAACAAAAAATCTGTGTGATGGGACAGCattaatgaacaaaccagcagacccccgaccacattgtaaaacatctgtaaTGCTGTTTTGGTCCACTGCACGTTCATTGGATTTCGTTTTCATCTTCTGAGGCGAGTaatttattttgaacaaaaaggcccacagtggcttctccaaccacagcaaattccatttttctttttgatgttGGCTTCAGTTTATCAGCAATTgacagttttgttttctttgactcattggatggaaactacgaagacccggaagggacgtgatggtggagaaaaaaaaaatgggtgggagaaaaaaaacagagcTATAGGTTAACATATTGTTgaaagtttttgcgttccctcgcaaacatgttttgcgttatcttgcaAATATGTTGTTTGACAAATACTTCACTTCATACATGAAAACCCTGTTTTTGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000144264

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00039174 lncRNA upstream 52921 32406763 ~ 32411647 (+) True XLOC_019044
TCONS_00039429 lncRNA upstream 365248 32078057 ~ 32099320 (+) False XLOC_019042
TCONS_00039430 lncRNA upstream 365248 32079125 ~ 32099320 (+) False XLOC_019042
TCONS_00039432 lncRNA upstream 365248 32079214 ~ 32099320 (+) False XLOC_019042
TCONS_00039431 lncRNA upstream 365248 32079214 ~ 32099320 (+) False XLOC_019042
TCONS_00039440 lncRNA downstream 228070 32755414 ~ 32757958 (+) True XLOC_019046
TCONS_00039441 lncRNA downstream 500557 33027901 ~ 33029631 (+) False XLOC_019048
TCONS_00039442 lncRNA downstream 501121 33028465 ~ 33029631 (+) True XLOC_019048
TCONS_00039176 lncRNA downstream 721876 33249220 ~ 33326927 (+) False XLOC_019051
TCONS_00039443 lncRNA downstream 721987 33249331 ~ 33357123 (+) False XLOC_019051
TCONS_00037770 mRNA upstream 114857 32332616 ~ 32349711 (+) False XLOC_019043
TCONS_00037772 mRNA upstream 114857 32339158 ~ 32349711 (+) True XLOC_019043
TCONS_00037771 mRNA upstream 119219 32338897 ~ 32345349 (+) False XLOC_019043
TCONS_00037764 mRNA upstream 455725 31434251 ~ 32008843 (+) False XLOC_019038
TCONS_00037766 mRNA upstream 455725 31811202 ~ 32008843 (+) False XLOC_019038
TCONS_00037774 mRNA downstream 292831 32820175 ~ 32821422 (+) True XLOC_019047
TCONS_00037775 mRNA downstream 645182 33172526 ~ 33187913 (+) True XLOC_019049
TCONS_00037777 mRNA downstream 660648 33187992 ~ 33212425 (+) False XLOC_019050
TCONS_00037776 mRNA downstream 660648 33187992 ~ 33212425 (+) True XLOC_019050
TCONS_00037778 mRNA downstream 722134 33249478 ~ 33447558 (+) False XLOC_019051
TCONS_00037769 other upstream 366141 32092771 ~ 32098427 (+) False XLOC_019042
TCONS_00037768 other upstream 433816 32030636 ~ 32030752 (+) True XLOC_019040
TCONS_00037726 other upstream 2477672 29986796 ~ 29986896 (+) True XLOC_019015
TCONS_00037725 other upstream 2858118 29606327 ~ 29606450 (+) True XLOC_019014
TCONS_00037722 other upstream 3358448 29105998 ~ 29106120 (+) True XLOC_019009
TCONS_00037783 other downstream 1109739 33637083 ~ 33645997 (+) False XLOC_019056
TCONS_00037784 other downstream 1109740 33637084 ~ 33646070 (+) False XLOC_019056
TCONS_00037785 other downstream 1109741 33637085 ~ 33646932 (+) False XLOC_019056
TCONS_00037789 other downstream 1228766 33756110 ~ 33765245 (+) False XLOC_019057
TCONS_00037790 other downstream 1228792 33756136 ~ 33765239 (+) True XLOC_019057

Expression Profile

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