RNA id: TCONS_00037783


Basic Information

Item Value
RNA id TCONS_00037783
length 978
RNA type processed_transcript
GC content 0.42
exon number 7
gene id XLOC_019056
representative False

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 33637083 ~ 33646932 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

attttttttacagattttattacatgctttagattcagggttaaggtcatcctcttctggattacagtaaaagaaaatccacagtcaatgtcatactcatcagctggagctttatttaaaaaaaatgtatgttctcTGCTCCAGCCAAAACGTGCAGATACCTTGCAGGTCTCTAGCTTGCACTCttgtattgttgtttattttgcagttattttgttgctttcTGAGAAGGATGATCAAGAAACCTTTCAACCCCTCTTCGTTTAGGCCACATGTCGAATttTTCAGTAGCAAACAAGCAGGAAAGTTCTTTGAAGGAACCAGGATGAGTTgaaaggtatttatagtggttggCCATCTCTGCCACAATAATCCTCTGATTCTCCTGAAGAATCCTTACAAGCAGGATGATGTTGAACACCCTCCTCTTTGTTGCTGGATCGCATACCATGCCATATGACAAAGACATCCACATcacttctgtttttttgttttctttgcttctgctaCTGACCACTCCTCTACATCACAGACCAAAGTCTTCCAACTGGTTTCCGGTCACTGCCAGTTCCATGGATTCTGTTTTGCAACTTGCTTTGCAGAGCTGTTGTGGTCTTCTGATATCAACAGGTCAGCAAGATGGCCAAATTGTTGAACATCTGCTAATTCCAGCACATGACCATGATAGTTACAGTAGCATGTCTGGTCACTGCAATCCTATAGAAGAAATATTGCACTGTTCAACCTCTTTCCCAAGAGTAAAACCACACATATCCTTGTATGCCTCACTCCATTTCAcCAACAGTCACTGGAGCAAGGCCCTCTCACAGTTGGGAAAATTCGAGTTCCTTTGAGCCTTGACTGATTCCAGAGTGGTCTTGGCCTTCCTTACATGGCGGTGCTTCCTGCAGATCACCAAGTTGTCATCAAGACTTGAGCTTATAATTGAGATCCTGATGATCAATCTGAGTATCAAGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000142019

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00039447 lncRNA upstream 171276 33464424 ~ 33465807 (+) True XLOC_019054
TCONS_00039177 lncRNA upstream 176155 33459562 ~ 33460928 (+) True XLOC_019053
TCONS_00039443 lncRNA upstream 279960 33249331 ~ 33357123 (+) False XLOC_019051
TCONS_00039446 lncRNA upstream 279960 33250082 ~ 33357123 (+) False XLOC_019051
TCONS_00039444 lncRNA upstream 306174 33249402 ~ 33330909 (+) False XLOC_019051
TCONS_00039179 lncRNA downstream 432738 34078735 ~ 34086225 (+) False XLOC_019059
TCONS_00039178 lncRNA downstream 432738 34078735 ~ 34086225 (+) True XLOC_019059
TCONS_00037796 lncRNA downstream 456738 34102735 ~ 34104134 (+) True XLOC_019060
TCONS_00037807 lncRNA downstream 1229843 34875840 ~ 34876697 (+) True XLOC_019065
TCONS_00037809 lncRNA downstream 1283587 34929584 ~ 34943930 (+) False XLOC_019066
TCONS_00037782 mRNA upstream 86801 33503835 ~ 33550282 (+) True XLOC_019055
TCONS_00037781 mRNA upstream 173189 33459524 ~ 33463894 (+) False XLOC_019053
TCONS_00037780 mRNA upstream 178653 33454147 ~ 33458430 (+) True XLOC_019052
TCONS_00037779 mRNA upstream 189473 33311622 ~ 33447610 (+) True XLOC_019051
TCONS_00037778 mRNA upstream 189525 33249478 ~ 33447558 (+) False XLOC_019051
TCONS_00037791 mRNA downstream 387583 34033580 ~ 34075107 (+) True XLOC_019058
TCONS_00037792 mRNA downstream 442113 34088110 ~ 34099836 (+) False XLOC_019060
TCONS_00037793 mRNA downstream 442113 34088110 ~ 34118206 (+) False XLOC_019060
TCONS_00037794 mRNA downstream 442205 34088202 ~ 34104214 (+) False XLOC_019060
TCONS_00037795 mRNA downstream 442380 34088377 ~ 34118530 (+) False XLOC_019060
TCONS_00037773 other upstream 1109739 32464568 ~ 32527344 (+) True XLOC_019045
TCONS_00037769 other upstream 1538656 32092771 ~ 32098427 (+) False XLOC_019042
TCONS_00037768 other upstream 1606331 32030636 ~ 32030752 (+) True XLOC_019040
TCONS_00037726 other upstream 3650187 29986796 ~ 29986896 (+) True XLOC_019015
TCONS_00037725 other upstream 4030633 29606327 ~ 29606450 (+) True XLOC_019014
TCONS_00037789 other downstream 110113 33756110 ~ 33765245 (+) False XLOC_019057
TCONS_00037790 other downstream 110139 33756136 ~ 33765239 (+) True XLOC_019057
TCONS_00037801 other downstream 521146 34167143 ~ 34176859 (+) False XLOC_019062
TCONS_00037808 other downstream 1283601 34929598 ~ 34941636 (+) True XLOC_019066
TCONS_00037825 other downstream 1876705 35522702 ~ 35522834 (+) True XLOC_019073