RNA id: TCONS_00038711


Basic Information

Item Value
RNA id TCONS_00038711
length 117
RNA type rRNA
GC content 0.55
exon number 1
gene id XLOC_019662
representative True

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 28063206 ~ 28063322 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCCGGCAgccagctctctgcaactctcacatggttgcccactgaggCCAAGCAGGACTgcacccagtcagtacctggatgaaagaccacatgggaaagctataGGTTGTTGCTAGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000177198

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00038704 lncRNA downstream 496468 27558490 ~ 27566738 (-) True XLOC_019658
TCONS_00038697 lncRNA downstream 619601 27441725 ~ 27443605 (-) True XLOC_019656
TCONS_00038695 lncRNA downstream 649936 27407482 ~ 27413270 (-) True XLOC_019655
TCONS_00038687 lncRNA downstream 854581 27204901 ~ 27208625 (-) False XLOC_019652
TCONS_00039656 lncRNA downstream 871772 27188124 ~ 27191434 (-) True XLOC_019649
TCONS_00038712 lncRNA upstream 82658 28145980 ~ 28234944 (-) True XLOC_019660
TCONS_00039657 lncRNA upstream 300152 28363474 ~ 28363814 (-) True XLOC_019663
TCONS_00039658 lncRNA upstream 339648 28402970 ~ 28411915 (-) True XLOC_019664
TCONS_00039245 lncRNA upstream 429755 28493077 ~ 28500621 (-) False XLOC_019666
TCONS_00038715 lncRNA upstream 429755 28493077 ~ 28502262 (-) False XLOC_019666
TCONS_00038707 mRNA downstream 181454 27636288 ~ 27881752 (-) False XLOC_019660
TCONS_00038705 mRNA downstream 443505 27575758 ~ 27619701 (-) False XLOC_019659
TCONS_00038706 mRNA downstream 443505 27578379 ~ 27619701 (-) True XLOC_019659
TCONS_00038700 mRNA downstream 555420 27482318 ~ 27507786 (-) False XLOC_019657
TCONS_00038713 mRNA upstream 352566 28415888 ~ 28439596 (-) False XLOC_019665
TCONS_00038714 mRNA upstream 354831 28418153 ~ 28439596 (-) True XLOC_019665
TCONS_00038717 mRNA upstream 449735 28513057 ~ 28523548 (-) False XLOC_019667
TCONS_00038719 mRNA upstream 491394 28554716 ~ 28737320 (-) False XLOC_019669
TCONS_00038720 mRNA upstream 491858 28555180 ~ 28640316 (-) False XLOC_019669
TCONS_00038710 other downstream 116815 27946274 ~ 27946391 (-) True XLOC_019661
TCONS_00038703 other downstream 574245 27484091 ~ 27488961 (-) True XLOC_019657
TCONS_00038698 other downstream 580168 27482149 ~ 27483038 (-) False XLOC_019657
TCONS_00038689 other downstream 841902 27204999 ~ 27221304 (-) False XLOC_019652
TCONS_00038674 other downstream 1144303 26917928 ~ 26918903 (-) True XLOC_019646
TCONS_00038723 other upstream 720505 28783827 ~ 28783944 (-) True XLOC_019671
TCONS_00038726 other upstream 882693 28946015 ~ 28950927 (-) False XLOC_019673
TCONS_00038727 other upstream 882693 28946015 ~ 28952986 (-) False XLOC_019673
TCONS_00038729 other upstream 886927 28950249 ~ 28952522 (-) False XLOC_019673
TCONS_00038752 other upstream 1670114 29733436 ~ 29971309 (-) False XLOC_019685

Expression Profile

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