Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040111 |
| length | 1246 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 8 |
| gene id | XLOC_020144 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 7462997 ~ 7470338 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0005615 | extracellular space | cellular_component |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050522-187 | Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in extracellular space. |
| ensembl_id | ENSDART00000106082 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00041874 | lncRNA | upstream | 10577 | 7452173 ~ 7452420 (+) | True | XLOC_020143 |
| TCONS_00042043 | lncRNA | upstream | 18792 | 7439527 ~ 7444205 (+) | False | XLOC_020142 |
| TCONS_00042042 | lncRNA | upstream | 395208 | 7033248 ~ 7067789 (+) | False | XLOC_020141 |
| TCONS_00040104 | lncRNA | upstream | 395208 | 7033381 ~ 7067789 (+) | True | XLOC_020141 |
| TCONS_00042041 | lncRNA | upstream | 435481 | 7025462 ~ 7027516 (+) | False | XLOC_020140 |
| TCONS_00042044 | lncRNA | downstream | 75486 | 7545824 ~ 7556620 (+) | True | XLOC_020149 |
| TCONS_00042045 | lncRNA | downstream | 206014 | 7676352 ~ 7972344 (+) | True | XLOC_020151 |
| TCONS_00042046 | lncRNA | downstream | 206893 | 7677231 ~ 7972869 (+) | True | XLOC_020152 |
| TCONS_00042047 | lncRNA | downstream | 300579 | 7770917 ~ 7801971 (+) | True | XLOC_020155 |
| TCONS_00042048 | lncRNA | downstream | 451198 | 7921536 ~ 7926032 (+) | False | XLOC_020157 |
| TCONS_00040105 | mRNA | upstream | 15606 | 7439186 ~ 7447391 (+) | False | XLOC_020142 |
| TCONS_00040106 | mRNA | upstream | 18483 | 7439476 ~ 7444514 (+) | False | XLOC_020142 |
| TCONS_00040107 | mRNA | upstream | 20406 | 7439514 ~ 7442591 (+) | False | XLOC_020142 |
| TCONS_00040102 | mRNA | upstream | 548440 | 6905210 ~ 6914557 (+) | True | XLOC_020138 |
| TCONS_00040101 | mRNA | upstream | 568969 | 6892296 ~ 6894028 (+) | True | XLOC_020137 |
| TCONS_00040112 | mRNA | downstream | 2082 | 7472420 ~ 7476352 (+) | True | XLOC_020145 |
| TCONS_00040113 | mRNA | downstream | 10127 | 7480465 ~ 7483755 (+) | True | XLOC_020146 |
| TCONS_00040114 | mRNA | downstream | 16529 | 7486867 ~ 7492548 (+) | True | XLOC_020147 |
| TCONS_00040115 | mRNA | downstream | 26981 | 7497319 ~ 7508894 (+) | True | XLOC_020148 |
| TCONS_00040116 | mRNA | downstream | 184933 | 7655271 ~ 7662596 (+) | True | XLOC_020150 |
| TCONS_00040110 | other | upstream | 18792 | 7443599 ~ 7444205 (+) | True | XLOC_020142 |
| TCONS_00040109 | other | upstream | 18952 | 7443315 ~ 7444045 (+) | False | XLOC_020142 |
| TCONS_00040108 | other | upstream | 18975 | 7439527 ~ 7444022 (+) | False | XLOC_020142 |
| TCONS_00040103 | other | upstream | 514491 | 6943403 ~ 6948506 (+) | False | XLOC_020139 |
| TCONS_00040089 | other | upstream | 886057 | 6571847 ~ 6576940 (+) | True | XLOC_020123 |
| TCONS_00040122 | other | downstream | 795195 | 8265533 ~ 8265649 (+) | True | XLOC_020159 |
| TCONS_00040135 | other | downstream | 1224758 | 8695096 ~ 8699233 (+) | False | XLOC_020176 |
| TCONS_00040140 | other | downstream | 1296029 | 8766367 ~ 8769393 (+) | True | XLOC_020179 |
| TCONS_00040142 | other | downstream | 1315829 | 8786167 ~ 8786293 (+) | False | XLOC_020180 |
| TCONS_00040167 | other | downstream | 1889561 | 9359899 ~ 9383484 (+) | True | XLOC_020197 |
