Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040115 |
| length | 921 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 8 |
| gene id | XLOC_020148 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 7497319 ~ 7508894 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0005615 | extracellular space | cellular_component |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040801-186 | Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in extracellular space. Is expressed in pancreas. |
| ensembl_id | ENSDART00000034564 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00041874 | lncRNA | upstream | 44899 | 7452173 ~ 7452420 (+) | True | XLOC_020143 |
| TCONS_00042043 | lncRNA | upstream | 53114 | 7439527 ~ 7444205 (+) | False | XLOC_020142 |
| TCONS_00042042 | lncRNA | upstream | 429530 | 7033248 ~ 7067789 (+) | False | XLOC_020141 |
| TCONS_00040104 | lncRNA | upstream | 429530 | 7033381 ~ 7067789 (+) | True | XLOC_020141 |
| TCONS_00041873 | lncRNA | upstream | 469820 | 7026374 ~ 7027499 (+) | True | XLOC_020140 |
| TCONS_00042044 | lncRNA | downstream | 36930 | 7545824 ~ 7556620 (+) | True | XLOC_020149 |
| TCONS_00042045 | lncRNA | downstream | 167458 | 7676352 ~ 7972344 (+) | True | XLOC_020151 |
| TCONS_00042046 | lncRNA | downstream | 168337 | 7677231 ~ 7972869 (+) | True | XLOC_020152 |
| TCONS_00042047 | lncRNA | downstream | 262023 | 7770917 ~ 7801971 (+) | True | XLOC_020155 |
| TCONS_00042048 | lncRNA | downstream | 412642 | 7921536 ~ 7926032 (+) | False | XLOC_020157 |
| TCONS_00040114 | mRNA | upstream | 4771 | 7486867 ~ 7492548 (+) | True | XLOC_020147 |
| TCONS_00040113 | mRNA | upstream | 13564 | 7480465 ~ 7483755 (+) | True | XLOC_020146 |
| TCONS_00040112 | mRNA | upstream | 20967 | 7472420 ~ 7476352 (+) | True | XLOC_020145 |
| TCONS_00040111 | mRNA | upstream | 26981 | 7462997 ~ 7470338 (+) | True | XLOC_020144 |
| TCONS_00040106 | mRNA | upstream | 52805 | 7439476 ~ 7444514 (+) | False | XLOC_020142 |
| TCONS_00040116 | mRNA | downstream | 146377 | 7655271 ~ 7662596 (+) | True | XLOC_020150 |
| TCONS_00040117 | mRNA | downstream | 230072 | 7738966 ~ 7739549 (+) | True | XLOC_020153 |
| TCONS_00040118 | mRNA | downstream | 233317 | 7742211 ~ 7754391 (+) | True | XLOC_020154 |
| TCONS_00040119 | mRNA | downstream | 283897 | 7792791 ~ 7795193 (+) | True | XLOC_020156 |
| TCONS_00040120 | mRNA | downstream | 414819 | 7923713 ~ 7929272 (+) | True | XLOC_020157 |
| TCONS_00040110 | other | upstream | 53114 | 7443599 ~ 7444205 (+) | True | XLOC_020142 |
| TCONS_00040109 | other | upstream | 53274 | 7443315 ~ 7444045 (+) | False | XLOC_020142 |
| TCONS_00040108 | other | upstream | 53297 | 7439527 ~ 7444022 (+) | False | XLOC_020142 |
| TCONS_00040103 | other | upstream | 548813 | 6943403 ~ 6948506 (+) | False | XLOC_020139 |
| TCONS_00040089 | other | upstream | 920379 | 6571847 ~ 6576940 (+) | True | XLOC_020123 |
| TCONS_00040122 | other | downstream | 756639 | 8265533 ~ 8265649 (+) | True | XLOC_020159 |
| TCONS_00040135 | other | downstream | 1186202 | 8695096 ~ 8699233 (+) | False | XLOC_020176 |
| TCONS_00040140 | other | downstream | 1257473 | 8766367 ~ 8769393 (+) | True | XLOC_020179 |
| TCONS_00040142 | other | downstream | 1277273 | 8786167 ~ 8786293 (+) | False | XLOC_020180 |
| TCONS_00040167 | other | downstream | 1851005 | 9359899 ~ 9383484 (+) | True | XLOC_020197 |
