Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040144 |
| length | 857 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 5 |
| gene id | XLOC_020180 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 8772363 ~ 8809496 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-100922-82 | Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000139940 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00042053 | lncRNA | upstream | 38802 | 8621298 ~ 8761630 (+) | True | XLOC_020174 |
| TCONS_00042054 | lncRNA | upstream | 100502 | 8697259 ~ 8699930 (+) | True | XLOC_020176 |
| TCONS_00041878 | lncRNA | upstream | 225525 | 8571065 ~ 8574907 (+) | False | XLOC_020171 |
| TCONS_00041879 | lncRNA | upstream | 225625 | 8571068 ~ 8574807 (+) | True | XLOC_020171 |
| TCONS_00041877 | lncRNA | upstream | 229093 | 8570621 ~ 8571339 (+) | False | XLOC_020171 |
| TCONS_00042057 | lncRNA | downstream | 13153 | 8821497 ~ 8837723 (+) | True | XLOC_020181 |
| TCONS_00042058 | lncRNA | downstream | 30081 | 8838425 ~ 8854534 (+) | False | XLOC_020182 |
| TCONS_00042059 | lncRNA | downstream | 40785 | 8849129 ~ 8854534 (+) | True | XLOC_020182 |
| TCONS_00041880 | lncRNA | downstream | 77704 | 8886048 ~ 8894141 (+) | True | XLOC_020183 |
| TCONS_00041881 | lncRNA | downstream | 119021 | 8927365 ~ 8953552 (+) | True | XLOC_020184 |
| TCONS_00040141 | mRNA | upstream | 12239 | 8772363 ~ 8788193 (+) | False | XLOC_020180 |
| TCONS_00040138 | mRNA | upstream | 30075 | 8753092 ~ 8770357 (+) | False | XLOC_020179 |
| TCONS_00040139 | mRNA | upstream | 30961 | 8753365 ~ 8769471 (+) | False | XLOC_020179 |
| TCONS_00040137 | mRNA | upstream | 66705 | 8728969 ~ 8733727 (+) | True | XLOC_020178 |
| TCONS_00040136 | mRNA | upstream | 97531 | 8701238 ~ 8702901 (+) | True | XLOC_020177 |
| TCONS_00040145 | mRNA | downstream | 171611 | 8979955 ~ 8996337 (+) | False | XLOC_020185 |
| TCONS_00040146 | mRNA | downstream | 194746 | 9003090 ~ 9009188 (+) | True | XLOC_020186 |
| TCONS_00040147 | mRNA | downstream | 201152 | 9009496 ~ 9057108 (+) | False | XLOC_020187 |
| TCONS_00040148 | mRNA | downstream | 219540 | 9027884 ~ 9032861 (+) | False | XLOC_020187 |
| TCONS_00040149 | mRNA | downstream | 225942 | 9034286 ~ 9040190 (+) | False | XLOC_020187 |
| TCONS_00040142 | other | upstream | 14139 | 8786167 ~ 8786293 (+) | False | XLOC_020180 |
| TCONS_00040140 | other | upstream | 31039 | 8766367 ~ 8769393 (+) | True | XLOC_020179 |
| TCONS_00040135 | other | upstream | 101199 | 8695096 ~ 8699233 (+) | False | XLOC_020176 |
| TCONS_00040122 | other | upstream | 534783 | 8265533 ~ 8265649 (+) | True | XLOC_020159 |
| TCONS_00040110 | other | upstream | 1356227 | 7443599 ~ 7444205 (+) | True | XLOC_020142 |
| TCONS_00040167 | other | downstream | 551555 | 9359899 ~ 9383484 (+) | True | XLOC_020197 |
| TCONS_00040182 | other | downstream | 978723 | 9787067 ~ 9789804 (+) | True | XLOC_020205 |
| TCONS_00040207 | other | downstream | 1350814 | 10159158 ~ 10164164 (+) | False | XLOC_020223 |
| TCONS_00040218 | other | downstream | 1685911 | 10494255 ~ 10513982 (+) | True | XLOC_020229 |
| TCONS_00040220 | other | downstream | 1745384 | 10553728 ~ 10558972 (+) | True | XLOC_020230 |
