Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1241404 |
| length | 219 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G1091443 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 57094564 ~ 57094782 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1241401 | lncRNA | upstream | 4290 | 57090050 ~ 57090274 (+) | True | G1091440 |
| TU1241282 | lncRNA | upstream | 55119 | 57035748 ~ 57039445 (+) | True | G1091330 |
| TU1241148 | lncRNA | upstream | 267454 | 56789322 ~ 56827110 (+) | True | G1091212 |
| TU1241173 | lncRNA | upstream | 338496 | 56755768 ~ 56756068 (+) | True | G1091237 |
| TU1241167 | lncRNA | upstream | 348068 | 56746260 ~ 56746496 (+) | True | G1091231 |
| TU1241405 | lncRNA | downstream | 736 | 57095518 ~ 57095740 (+) | True | G1091444 |
| TU1241420 | lncRNA | downstream | 42885 | 57137667 ~ 57138199 (+) | True | G1091459 |
| TU1241430 | lncRNA | downstream | 46037 | 57140819 ~ 57141053 (+) | True | G1091469 |
| TU1241431 | lncRNA | downstream | 46727 | 57141509 ~ 57141711 (+) | True | G1091470 |
| TU1241433 | lncRNA | downstream | 47602 | 57142384 ~ 57142635 (+) | True | G1091472 |
| XM_036937856.1 | mRNA | upstream | 60862 | 56913023 ~ 57033702 (+) | False | camkk1a |
| XM_036937858.1 | mRNA | upstream | 60862 | 56913023 ~ 57033702 (+) | True | camkk1a |
| XM_036937857.1 | mRNA | upstream | 79017 | 56913023 ~ 57015547 (+) | False | camkk1a |
| XM_036937854.1 | mRNA | upstream | 225454 | 56792616 ~ 56869110 (+) | False | LOC110537826 |
| LOC110537831 | mRNA | downstream | 18120 | 57112902 ~ 57118165 (+) | False | LOC110537831 |
| XM_021624249.2 | mRNA | downstream | 31965 | 57126747 ~ 57131602 (+) | False | LOC110537832 |
| XM_021624250.2 | mRNA | downstream | 31966 | 57126748 ~ 57131447 (+) | True | LOC110537832 |
| XM_021624252.2 | mRNA | downstream | 51733 | 57146515 ~ 57185366 (+) | False | LOC110537833 |
| XM_021624251.2 | mRNA | downstream | 51734 | 57146516 ~ 57185366 (+) | True | LOC110537833 |
| TU1241171 | other | upstream | 341617 | 56752418 ~ 56752947 (+) | True | G1091235 |
| TU1241153 | other | upstream | 368561 | 56725607 ~ 56726003 (+) | True | G1091217 |
| TU1237658 | other | upstream | 2813843 | 54274306 ~ 54280721 (+) | True | LOC110538908 |
| TU1237606 | other | upstream | 2945602 | 54109690 ~ 54148962 (+) | True | G1087914 |
| TU1235839 | other | upstream | 4437069 | 52649604 ~ 52657495 (+) | True | G1086237 |
| TU1241421 | other | downstream | 21043 | 57115825 ~ 57117927 (+) | True | LOC110537831 |
| TU1241907 | other | downstream | 804689 | 57899471 ~ 57914832 (+) | True | LOC110537841 |
| TU1241903 | other | downstream | 1121373 | 58216155 ~ 58222190 (+) | False | LOC118937686 |
| TU1244093 | other | downstream | 2446776 | 59541558 ~ 59542603 (+) | True | G1093909 |
| TU1244425 | other | downstream | 2936221 | 60031003 ~ 60034020 (+) | True | G1094218 |
