Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004018 |
| length | 841 |
| RNA type | processed_transcript |
| GC content | 0.50 |
| exon number | 4 |
| gene id | XLOC_002078 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 21434649 ~ 21470593 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006415 | translational termination | biological_process |
| GO:0002184 | cytoplasmic translational termination | biological_process |
| GO:0007420 | brain development | biological_process |
| GO:0018444 | translation release factor complex | cellular_component |
| GO:0005829 | cytosol | cellular_component |
| GO:0016149 | translation release factor activity, codon specific | molecular_function |
| GO:0003747 | translation release factor activity | molecular_function |
| GO:1990825 | sequence-specific mRNA binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-021029-1 | Predicted to enable sequence-specific mRNA binding activity and translation release factor activity, codon specific. Acts upstream of or within brain development. Predicted to be located in cytoplasm. Predicted to be part of translation release factor complex. Predicted to be active in cytosol. Orthologous to human ETF1 (eukaryotic translation termination factor 1). |
| ensembl_id | ENSDART00000147181 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005877 | lncRNA | upstream | 226590 | 21179484 ~ 21208200 (+) | False | XLOC_002074 |
| TCONS_00005878 | lncRNA | upstream | 245654 | 21179547 ~ 21189136 (+) | True | XLOC_002074 |
| TCONS_00005876 | lncRNA | upstream | 328080 | 21103921 ~ 21106710 (+) | True | XLOC_002073 |
| TCONS_00005875 | lncRNA | upstream | 696114 | 20731614 ~ 20738676 (+) | True | XLOC_002072 |
| TCONS_00005874 | lncRNA | upstream | 766929 | 20665016 ~ 20667861 (+) | True | XLOC_002070 |
| TCONS_00004023 | lncRNA | downstream | 1553 | 21444665 ~ 21452135 (+) | False | XLOC_002078 |
| TCONS_00005879 | lncRNA | downstream | 99409 | 21542521 ~ 21543562 (+) | True | XLOC_002081 |
| TCONS_00004040 | lncRNA | downstream | 227751 | 21670863 ~ 21672339 (+) | False | XLOC_002085 |
| TCONS_00004041 | lncRNA | downstream | 228107 | 21671219 ~ 21674300 (+) | False | XLOC_002085 |
| TCONS_00004043 | lncRNA | downstream | 229141 | 21672253 ~ 21674458 (+) | True | XLOC_002085 |
| TCONS_00004012 | mRNA | upstream | 5792 | 21395298 ~ 21428998 (+) | True | XLOC_002076 |
| TCONS_00004008 | mRNA | upstream | 802011 | 20628698 ~ 20632779 (+) | False | XLOC_002068 |
| TCONS_00004009 | mRNA | upstream | 802215 | 20630444 ~ 20632575 (+) | True | XLOC_002068 |
| TCONS_00004007 | mRNA | upstream | 807995 | 20608676 ~ 20626795 (+) | True | XLOC_002067 |
| TCONS_00004005 | mRNA | upstream | 825715 | 20589969 ~ 20609075 (+) | False | XLOC_002067 |
| TCONS_00004022 | mRNA | downstream | 1542 | 21444654 ~ 21470593 (+) | False | XLOC_002078 |
| TCONS_00004024 | mRNA | downstream | 1553 | 21444665 ~ 21470590 (+) | True | XLOC_002078 |
| TCONS_00004025 | mRNA | downstream | 68383 | 21511495 ~ 21521507 (+) | True | XLOC_002079 |
| TCONS_00004026 | mRNA | downstream | 79433 | 21522545 ~ 21530675 (+) | True | XLOC_002080 |
| TCONS_00004027 | mRNA | downstream | 116493 | 21559605 ~ 21647604 (+) | False | XLOC_002082 |
| TCONS_00004014 | other | upstream | 29819 | 21397367 ~ 21404971 (+) | False | XLOC_002077 |
| TCONS_00004015 | other | upstream | 32624 | 21399715 ~ 21402166 (+) | True | XLOC_002077 |
| TCONS_00004013 | other | upstream | 35085 | 21397320 ~ 21399705 (+) | False | XLOC_002077 |
| TCONS_00004011 | other | upstream | 198112 | 21236564 ~ 21236678 (+) | True | XLOC_002075 |
| TCONS_00004010 | other | upstream | 750640 | 20684036 ~ 20684150 (+) | True | XLOC_002071 |
| TCONS_00004038 | other | downstream | 227719 | 21670831 ~ 21674289 (+) | False | XLOC_002085 |
| TCONS_00004039 | other | downstream | 227745 | 21670857 ~ 21673021 (+) | False | XLOC_002085 |
| TCONS_00004042 | other | downstream | 228110 | 21671222 ~ 21674289 (+) | False | XLOC_002085 |
| TCONS_00004046 | other | downstream | 258439 | 21701551 ~ 21818605 (+) | False | XLOC_002083 |
| TCONS_00004047 | other | downstream | 258439 | 21701551 ~ 21820057 (+) | False | XLOC_002083 |
