RNA id: TCONS_00043776


Basic Information

Item Value
RNA id TCONS_00043776
length 115
RNA type rRNA
GC content 0.49
exon number 1
gene id XLOC_022167
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 9852896 ~ 9853010 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tcacagccatatcacccagGAGCCGAAGACCGATTACTCTattaagctaagcagggctgagcctggtcagtacctggatgggagattacatgggaaaactaggttgctgtttgaA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000188933

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00043769 lncRNA downstream 45357 9794730 ~ 9807539 (-) False XLOC_022165
TCONS_00044958 lncRNA downstream 430547 9415480 ~ 9422349 (-) True XLOC_022163
TCONS_00044957 lncRNA downstream 1016558 8835967 ~ 8836338 (-) True XLOC_022160
TCONS_00044956 lncRNA downstream 1052141 8799037 ~ 8800755 (-) True XLOC_022159
TCONS_00044954 lncRNA downstream 1571150 8263559 ~ 8281746 (-) False XLOC_022157
TCONS_00043788 lncRNA upstream 397197 10250207 ~ 10251099 (-) False XLOC_022171
TCONS_00043789 lncRNA upstream 398210 10251220 ~ 10252276 (-) True XLOC_022171
TCONS_00044959 lncRNA upstream 439158 10292168 ~ 10394443 (-) False XLOC_022172
TCONS_00044960 lncRNA upstream 462360 10315370 ~ 10317412 (-) False XLOC_022172
TCONS_00044961 lncRNA upstream 462360 10315370 ~ 10394444 (-) True XLOC_022172
TCONS_00043770 mRNA downstream 45318 9794730 ~ 9807578 (-) False XLOC_022165
TCONS_00043771 mRNA downstream 45350 9800722 ~ 9807546 (-) True XLOC_022165
TCONS_00043768 mRNA downstream 84196 9567334 ~ 9768700 (-) True XLOC_022164
TCONS_00043767 mRNA downstream 360630 9401598 ~ 9492266 (-) False XLOC_022163
TCONS_00043766 mRNA downstream 360841 9400425 ~ 9492055 (-) False XLOC_022163
TCONS_00043777 mRNA upstream 55930 9908940 ~ 9919959 (-) False XLOC_022168
TCONS_00043778 mRNA upstream 55939 9908949 ~ 9925568 (-) True XLOC_022168
TCONS_00043779 mRNA upstream 85226 9938236 ~ 9965148 (-) False XLOC_022169
TCONS_00043780 mRNA upstream 96254 9949264 ~ 10048533 (-) False XLOC_022169
TCONS_00043781 mRNA upstream 120570 9973580 ~ 9991060 (-) False XLOC_022169
TCONS_00043765 other downstream 497965 9354822 ~ 9354931 (-) True XLOC_022162
TCONS_00043764 other downstream 536202 9316578 ~ 9316694 (-) True XLOC_022161
TCONS_00043759 other downstream 1940673 7912109 ~ 7912223 (-) True XLOC_022154
TCONS_00043758 other downstream 2029111 7799093 ~ 7823785 (-) True XLOC_022153
TCONS_00043749 other downstream 2271594 7581186 ~ 7581302 (-) True XLOC_022149
TCONS_00043794 other upstream 810932 10663942 ~ 10681453 (-) False XLOC_022175
TCONS_00043804 other upstream 1679330 11532340 ~ 11532470 (-) True XLOC_022182
TCONS_00043805 other upstream 1734407 11587417 ~ 11587532 (-) True XLOC_022183
TCONS_00043813 other upstream 2215110 12068120 ~ 12068234 (-) True XLOC_022187
TCONS_00043831 other upstream 3782783 13635793 ~ 13635907 (-) True XLOC_022200